Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00595 ATGGAGGTGATGCGTCACTGTTCAAGGTTCCTTCTTCCTCCCAACAGCAACGATACTCGTTGTATGAGGTACGCTCTTGTGGTCCTCAATCAACGTCTTCCTAGATTCGCTGCTCTCCTTTGGGACCACGCGCAGGTGCGAGTGTGTGCTGATGGAGGTGCCAACAGGGTGTTTGATGAAATGCCTCTTCTCTTCCCTCTTCAACATCCTTCCCAAGTTCGCTCCAGGTACAAGCCAGATGTAATCAAAGGCGACATGGATTCTATCAGGAAAGATGTCCTTCATTTCTATACAAACCTTGGGACAAAGATACTTGATGCTTCTCATGATCAGGATACTACCGATTTGCACAAATGTGTAGCATACTTACGTGACCTAACAACACCAAATACTGATGAATCAGCTTTGTGTATTCTTGTTGCTGGAGCTCTTGGTGGGAGATTTGACCATGAGATGGGAAATATCAATGTTCTCTGCCGATTCTCCAGCACACGAATTATCCTTCTATCTGATGATTGCCTTATTCAGCTTCTTCCAAAGAATCACCGCCATGAGATAGTTATTCAATCTTCCGTCGAGGGTCCGCATTGTGGACTTATTCCCATTGGGATGCCATCTGCAAGTTCTACCACCACCGGACTCCAGTGGGACCTCAATGACACGGAGATGAAATTTGGAGGTTTAATAAGCACCTCAAATATTGTAAAAGGGGATATTGTAACAGTAGAGTCTGATTCAGATCTTCTTTGGACTATTTCTATCAAGAAACTGTAG 774 0.4457 MEVMRHCSRFLLPPNSNDTRCMRYALVVLNQRLPRFAALLWDHAQVRVCADGGANRVFDEMPLLFPLQHPSQVRSRYKPDVIKGDMDSIRKDVLHFYTNLGTKILDASHDQDTTDLHKCVAYLRDLTTPNTDESALCILVAGALGGRFDHEMGNINVLCRFSSTRIILLSDDCLIQLLPKNHRHEIVIQSSVEGPHCGLIPIGMPSASSTTTGLQWDLNDTEMKFGGLISTSNIVKGDIVTVESDSDLLWTISIKKL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00595 257 SMART TPK_B1_binding_a_2_a 182 248 IPR007373 GO:0009229|GO:0030975
Aip06g00595 257 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 18 174 IPR036759 GO:0004788|GO:0005524|GO:0009229
Aip06g00595 257 TIGRFAM thi_PPkinase: thiamine pyrophosphokinase 26 252 IPR006282 GO:0004788|GO:0006772
Aip06g00595 257 CDD TPK 25 252 IPR007371 GO:0004788|GO:0005524|GO:0009229
Aip06g00595 257 Gene3D Thiamin pyrophosphokinase, catalytic domain 24 165 IPR036759 GO:0004788|GO:0005524|GO:0009229
Aip06g00595 257 Pfam Thiamin pyrophosphokinase, catalytic domain 38 166 IPR007371 GO:0004788|GO:0005524|GO:0009229
Aip06g00595 257 PANTHER THIAMINE PYROPHOSPHOKINASE 1 3 255 - -
Aip06g00595 257 PANTHER THIAMIN PYROPHOSPHOKINASE 3 255 - -
Aip06g00595 257 PIRSF TPK1 1 257 IPR016966 GO:0004788|GO:0005524|GO:0009229
Aip06g00595 257 Gene3D - 166 256 - -
Aip06g00595 257 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 177 256 IPR036371 GO:0009229
Aip06g00595 257 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 183 249 IPR007373 GO:0009229|GO:0030975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00595 Aip-Chr6 7788103 7790593 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00595 K00949 - gmx:100786303 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00595 06 7788103 7790593 Aip06g00595 06 7788103 7790593 ECH