Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00566 ATGGAGGATAGCCAGGAAATTGAGAAGCAGGTGCAGGAAGAAGTGATTTCAGATAATGGAACTGAAAAGAAGCAGGAAACTCGTGATGAGATGCTTTCGCGGCACAGGAAAGAGATATCACAACTGCAGAAAAAAGAAATTGAAATGAAAAAGGCAGCAGCTAGAGGTAGCAAGGCTGAACAGAAAGCTAAGAAGAAACAAGTGGAGGACGAGGTTACTCGACTTTCTGCTAATCTTAAAGAGAAACATGCAAAAGAACTGGCTGAATTAGGCTATAGCAGTGGTGGTAATGGGAATGAAAAGGGAAATTTAGACAGTTTGATAAAGGCCATAGCTGGAGTATCTGTTGCCAATCAGCCTGACCGTGCAAGGGTTAGCAAGGCCCAACAGAAGCGTGACCGAAGAGCTCAACAAGAAGCAGAAAGGGAGCAGAGAATCCAAGCAGAGCAGAGTGACACTATAAGTGATCGTACAATTGAAAATGAAAAATTGGAAAAGAAGTTGAAGCCTCTCGGTTTAACTGTGTGTGAAATAAAGCCTGATGGGCACTGCCTCTATAGAGCTGTTGAGGATCAGCTGGCCCTCCTCTCTGGCGGTAGATCACCTCATACATACCAAGAACTTCGAGAAATGGCGGCTGCTTATATGAGAAAGAATTCAGCTGAGTTCCTGCCGTTTTTCCTTTCGGAAAATTTGATCGAAGATGATTCAGATGAAACACTTGCTCAGAAATTTGAAAACTATTGTAAAGAGGTGGAGTCCACGGCTTTATGGGGAGGACAGTTAGAGCTTGGTGCCTTGACTCACTGCTTGAAGAAGCATATTATGATATTTTCAGGCTCCTTCCCGGATGTGGAGATGGGGAAGGAGTATAAATCCGCCGCTGCCACTGCCTCATTGAGTTCAAGTATTATGCTTTCCTACCACAAGCATGCTTTTGGACTTGGTGAGCATTATAATTCTGTGGTCCCAGCATGA 978 0.4407 MEDSQEIEKQVQEEVISDNGTEKKQETRDEMLSRHRKEISQLQKKEIEMKKAAARGSKAEQKAKKKQVEDEVTRLSANLKEKHAKELAELGYSSGGNGNEKGNLDSLIKAIAGVSVANQPDRARVSKAQQKRDRRAQQEAEREQRIQAEQSDTISDRTIENEKLEKKLKPLGLTVCEIKPDGHCLYRAVEDQLALLSGGRSPHTYQELREMAAAYMRKNSAEFLPFFLSENLIEDDSDETLAQKFENYCKEVESTALWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSAAATASLSSSIMLSYHKHAFGLGEHYNSVVPA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00566 325 PANTHER OTU DOMAIN CONTAINING PROTEIN 24 324 - -
Aip06g00566 325 Coils Coil 32 85 - -
Aip06g00566 325 PANTHER DEUBIQUITINASE OTUD6B 24 324 - -
Aip06g00566 325 ProSiteProfiles OTU domain profile. 173 325 IPR003323 -
Aip06g00566 325 SUPERFAMILY Cysteine proteinases 143 324 IPR038765 -
Aip06g00566 325 MobiDBLite consensus disorder prediction 118 157 - -
Aip06g00566 325 MobiDBLite consensus disorder prediction 1 71 - -
Aip06g00566 325 MobiDBLite consensus disorder prediction 125 157 - -
Aip06g00566 325 Gene3D - 159 324 - -
Aip06g00566 325 Pfam OTU-like cysteine protease 179 319 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00566 Aip-Chr6 7452083 7455648 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00566 K18342 - gmx:100780620 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00566 06 7452083 7455648 Aip06g00566 06 7452083 7455648 ECH