Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00563 ATGGAGAAGGTGACAAGGTTGGCATCTGAGAAAGGGGTGGTGATCTTCACAAAAAGCTCATGCTGTTTGTGCTATGCAGTGAACATTCTGTTCCAAGAAATAGGGGTGAGTCCAGTGGTTCATGAGATTGATCAAGACCCTGATGGAAGGGAAATGGAGAAGGCTCTAATGAGGCTAGGTTGCAATGCACCTGTGCCTGCAGTGTTCATTGGAGGGAAGCTAATGGGGTCCACCAATGAAATCATGTCCATGCACCTAAGTGGTTCACTCACTCAACTCCTCAAGCCATACCAAACTTCATTATCTTGA 309 0.4628 MEKVTRLASEKGVVIFTKSSCCLCYAVNILFQEIGVSPVVHEIDQDPDGREMEKALMRLGCNAPVPAVFIGGKLMGSTNEIMSMHLSGSLTQLLKPYQTSLS 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00563 102 CDD GRX_GRXh_1_2_like 13 93 - -
Aip06g00563 102 SUPERFAMILY Thioredoxin-like 1 97 IPR036249 -
Aip06g00563 102 PANTHER GLUTAREDOXIN 1 99 IPR011905 -
Aip06g00563 102 Pfam Glutaredoxin 13 74 IPR002109 -
Aip06g00563 102 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 99 - -
Aip06g00563 102 Gene3D Glutaredoxin 1 101 - -
Aip06g00563 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 99 IPR011905 -
Aip06g00563 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00563 Aip-Chr6 7299637 7299945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00563 1 95 Miscellaneous Gene Families AT4G15670 48.421 7.34e-33 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00563 K03676 - vvi:100247747 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00563 06 7299637 7299945 Aip06g00563 06 7299637 7299945 ECH
Aip06g00563 06 7299637 7299945 Aip02g02889 02 105192216 105192843 PCT
Aip02g02888 02 105179094 105179402 Aip06g00563 06 7299637 7299945 PCT