Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00558 ATGGGCAGTAGTAGTGTGGAAGGTGGAGGACTGCAAAGCAACGTCAAGGTTGTGGAGAGGGCAATACTAATGGGGACGAGACGGCGCCCTTGCGAGGTCGTGGTGCGCCTTCTTGGCCTCTTTCTTACTCTTGTTGCCACCATCATCGTTGGTGTTGATAAAGAGACTAAGATCATTTCCTATGCTGGTATCAACTTCAAGGCCACTGCTAAGTGGGAATATCTCTCTGCTACCGTATTTTTGTTGGTGTCAAACGCCATAGCATGCTCGTATGCAGCTGCATCTTTGGTGATGTTGGAGATGGCAAAAAGAAGAAGAAACGATAATAGTGATGTGTTATCTACTTCAGTAGTAGAGTTTGGTGTAACGGTGATGGACCTTGTAATGATGGGACTGTTATTCTCAGCAAATGGTGCTGCTGCTGCTGTGGGAGTAATCGCACAGAACGGAAACTCCCACATTCAATGGATGAAAGTTTGCAATGTCTTTGATGCATATTGTCGCCACATGACCGCTGCATTTCTCCTCTCTTTCTTTGCATCCATTTCATTCCTCTTCATGGTTCTTTTCTCTCTCGTCAAACTCCATTATTACAAGTTTTCTACTTAA 609 0.4483 MGSSSVEGGGLQSNVKVVERAILMGTRRRPCEVVVRLLGLFLTLVATIIVGVDKETKIISYAGINFKATAKWEYLSATVFLLVSNAIACSYAAASLVMLEMAKRRRNDNSDVLSTSVVEFGVTVMDLVMMGLLFSANGAAAAVGVIAQNGNSHIQWMKVCNVFDAYCRHMTAAFLLSFFASISFLFMVLFSLVKLHYYKFST 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00558 202 Pfam Casparian strip membrane protein domain 28 182 IPR006702 -
Aip06g00558 202 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 5 196 - -
Aip06g00558 202 PANTHER CASP-LIKE PROTEIN 1E1 5 196 - -
Aip06g00558 202 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 33 194 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00558 Aip-Chr6 7223504 7224647 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00558 - - adu:107492438 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00558 06 7223504 7224647 Aip06g00558 06 7223504 7224647 ECH