Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00553 ATGGTGGAAAAAGCAGAAGTGATAATCGTAGGTGCTGGAACTTCAGGTTTAGCTGCTGCAGCATGCTTAACACAAAAATCAGTACCATTCACTCTTCTCGAAAGAGAAGATTGTTTTGCTTCCTTATGGCAAAAATACACCTATGACCGTCTTCACCTTCACCTTGGAAAAAAAGTGTGTGAGCTTCCCTTTCTTCCATTCCCTGATTCCTACCCTCGCTATGTTCCTAAGAAGCTCTTCATTGAGTATTTAGACTCATATGTGAAGCACTTCAACATCAACCCTTTGTACCACAGATCTGTGGAGCTTGCGGAGTTTGATGAGGTGGATCGGAAGTGGAAGGTGAAGGCTAAGAATAGAAGCTCCGGTGAGGTTGAAGAGTACTCTGGAAGGTTCTTGGTGGTGGCTACTGGGGAGACTGCCGAGCCACGTGTCCCTCGGGTTGAAGGTTTGGAGAGTTTCAAAGGGAGAGTGATGCACTCCACAGGATACAAGAATGGGAAGGAGTTCAAAGATGAACATGTTCTTGTTGTTGGTGCTGGTAATTCTGGCATGGAGATCGCTTTGGACTTGTCCAATTTCGGTGCCAAACCTTCCATCATTGTTCGAAGCCCGGTTCATATTCTATCAAGGAATATGATGTATTATTCAGGGATGTTGTTAAAGTATTTGTCCCTAAGCACGGTGGAGAAGCTGCTTGTTATAGTGAGTAAGATAGTGTATGGGGATCTGAGCAAGTATGGGTTACCTTGGCCAAGTGAAGGACCTTTCACCATGAAAATCAAGTATGGCAAGTTTCCTATCATTGACTTGGGAACTATCAAGAAAATCAAGCATGGAGAGattcagGTGTTATCGGCAGAAATAGAGAAAGTTAGAGGTAACGAAGTGTTGTTTAGAGATGGCAAGTGCCACTCATTTGATTCGATCATATTCTGCACTGGCTTCAATACATCAACACAAAAGTGGCTCAAGGGGGGTGATGATCTTCTGAATGAGAATGGTTTAGTCAAGGCAAGTAATTTTCCAAATTACTGGAAGGGTAAGAGCAATTTGTACTGCGTTGGGCTTGCACAAAGAGGATTCTTTGGAGCTAGCAGTGATGCCCAAAATGTAGCAAATGATATTGCCTCACTTCTCAATTAA 1146 0.4311 MVEKAEVIIVGAGTSGLAAAACLTQKSVPFTLLEREDCFASLWQKYTYDRLHLHLGKKVCELPFLPFPDSYPRYVPKKLFIEYLDSYVKHFNINPLYHRSVELAEFDEVDRKWKVKAKNRSSGEVEEYSGRFLVVATGETAEPRVPRVEGLESFKGRVMHSTGYKNGKEFKDEHVLVVGAGNSGMEIALDLSNFGAKPSIIVRSPVHILSRNMMYYSGMLLKYLSLSTVEKLLVIVSKIVYGDLSKYGLPWPSEGPFTMKIKYGKFPIIDLGTIKKIKHGEIQVLSAEIEKVRGNEVLFRDGKCHSFDSIIFCTGFNTSTQKWLKGGDDLLNENGLVKASNFPNYWKGKSNLYCVGLAQRGFFGASSDAQNVANDIASLLN 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00553 381 SUPERFAMILY FAD/NAD(P)-binding domain 172 378 IPR036188 -
Aip06g00553 381 Gene3D - 1 381 IPR036188 -
Aip06g00553 381 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Aip06g00553 381 PRINTS Pyridine nucleotide disulphide reductase class-II signature 6 28 - -
Aip06g00553 381 PRINTS Pyridine nucleotide disulphide reductase class-II signature 170 194 - -
Aip06g00553 381 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 4 380 - -
Aip06g00553 381 PIRSF FMO 3 370 IPR000960 GO:0050660|GO:0050661
Aip06g00553 381 PRINTS FAD-dependent pyridine nucleotide reductase signature 7 26 - -
Aip06g00553 381 PRINTS FAD-dependent pyridine nucleotide reductase signature 174 192 - -
Aip06g00553 381 SUPERFAMILY FAD/NAD(P)-binding domain 5 215 IPR036188 -
Aip06g00553 381 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 4 380 - -
Aip06g00553 381 Pfam Flavin-binding monooxygenase-like 6 319 IPR020946 GO:0004499|GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00553 Aip-Chr6 7182419 7184547 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00553 K11816 - gmx:100777958 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00553 06 7182419 7184547 Aip06g00553 06 7182419 7184547 ECH