Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00548 ATGGCTGATGCCTCCTACGTCATTTGTTCTTCGTCACCACCTGGAGGTAAATTCAAAGATGCTGATGAAGATGCTCAGTTTCAAGAAACTGAACTCGTCAATGACACCTTAGTGCTCAATAGCCCCTTCACTGAACCCCAACTGGAAAATCTCAATCTGAACACTGAGCTTGTGGAGGATTCTGACCCTTCGGAGAATGTGGAAAGTGGTCCAACATGCGAGAATGGACAAGAAGTTGTGCTTGATAGCGAAGATGATGAAATGGACAATGGAAGGGCAGCATCTGCTGTGAGAGGGTTGGCTGATGATGGAACCAGTCCAGCTGCAAGAATTCCTTCAATGCACTTCCAGAAGAGACCTGTAAAGCCACCTTTCAAACAAGCAGATTCAAATGGCACTGCTTTTAGTAAAGCTGCTATTGGGGAGAAAGGAATTTCAGTTGATACCAAGATGTTAAATAACATTCACTCACCAGAGCCTGGGGATTCAACCCAAGCTGCTCTTGGGTTTGTGGATGAGTACTTGTCATCTAGTGATATGGACTTGCTTCAAGGAATTTATCACATAAAACCCACTAGAGAGAAATCACTTCATGTCCTGAGTGCAAGAGGATCACTAAGTTTGGCTAGAAAAATTAAAACTCAAACCCAGAATAGAGAAAAAGAACCCTTCAGATGGGATGGCGGTGATCAAGATGACAAAGGAGCTGGTATCTGGTGTAGAAAGGTTAACACAGCTTCAAATATTGGAAGTGAAAACCAGAAAGAAGGTGGACATCTTCAGAGCCAAGGAATACGGTGTGCAGGTGTTAGATGTGATGATGAGATTGAGAACATGGTCCAAAGACATGGAATTGAAACAAAAAATGAAAGTAACTCTCTCAAGGAGTTGGATGTTCAGTCAAGTTTAATGAGAGAGAACGAGACTCCTTATTCCAGTGTGATACATACAGAAGACATGTTTGGTATTGGTTTAGATACTCAAATAGCTGCTGAAGCTATGGAGGCATTAGCATTTATGCCCACAACTGGCTGCCATTTCCATGATGCTCACCAACCTGAGAAAGCACCTGATGGCTCTTTGAGTGATTTGATAGAGAATAAAGGTCACTTGAAAAACTTGTTGCATAAACAGAATTCTGGTTTACAGTCCATAACAAAGAAATCAAAGAAGAGAAAGCACACTGAGAATCAGGAGCCAAATACTGTGTTGGTGGAAACACGAAAAATGATGAAAAGCAAGTCAACTATTAAGGGACAGTCTGAAAATAATACCACTTCACCAATACACAGTGAACTTGTCTCAATTGAAGAGGTTTGCTCAACAGGAGAGTATACTAGTTTTCAACCAGCCACCACAGAATCCAAAAATAAGAACAAGAGCAGAAGGCCAAGAAAGAAAAATCAATCAATCCATCATACAGAGAGGAACAATAATGTCAAGGCGGATGACACTATTAGGTGCAAGAGGAAGGGGGCTGATATAGAGGCTGATCCATTGAAGTTGGGAATTAGGACAAAACGTCTCAATTTACCTACCAATTTGTCTCGAAAGACTGTGAAAAACAGCCTGAATCACCAGGTTGAAGTTAGTCCACAGCTATCTGGATCCAGCAGTTTTTTAATAAATGATTCTCCTTCTTGGCTTTATCCTAAAAGAGCAAGGGGGAAAAGAAAGAAGGCTAATGTGCAAGACAATCTTGATGCACCTACTATTTTGTGCATTGATGGAAATGAAAGCAATGTCTGGTCCATTAACAGTATAGAACGCCAAAATGATGAGGATAAGTCATGCGTTGACAATAGCAGATGCTTGTCACAGGGGAATTCTGTTCAACCTGGTTCAGCTGACGATACGATGAAATTTGAAAGCTCACTTGATAAGCGATCCTCGTTGGCACGTGTTGAAATATCAGCTAATAAGAGCAGTGCACAATCCAGTCCAGAAATTCCAACAACAGTCTCCTCCAGTAAAGACTTAATAATGTCAAATAACAAACGCACATGCGATGAGCAGCACAACAAGCCATGCAACAAATGCCTTCGAAAGTCTCCCCTTCTGAAGGAGCTTATTAGATTAGGACGAAGAGATATGACATTTGTTCGAGTTCTGTTTAGCCAGCATTTGGATAACAATGTTGTCAAGAGGCAAAAAAAGGTCGTGGCAAGGCTCAATATATCTACTGCATCAAGCTCAATGGATGCCACACATTTCATAGCAGACAAATTTATACGCACAAAGAATATGTTGGAAATTATGGCTCTTGGTAAATTAGTGGTGACACACTTATGGCTTGAGAGTTGTGGGCAAGCAAACTGTTTTATTGATGAGAAAAATTACATTCTGAGGGATGTGAAAAAAGAAAAGGAGATAGGCTTTAGCATGCCTGTGTCTCTGGCTCAAGCAAGACAAACACCACTCCTGAAGGGTAAAAGAGTCTACATCACACCTCAAGTTAAACCTGATAAGAAAGTGGTTGCAACCTTGGTCAAAGCTGTTCAAGGCCAGGTAGTTGATGAAAGTCAGGTATGTGCAGAGAAGGATGATAAATTCTTAGATGATCTGTTGATTCTTTCTTGTGAAGAGGACTATGCAATATGCCACCATTTCCTTAGTAGAGGAACTGCTGTCTACAGTTCAGAGCTTCTTCTGAATGGCATTATTATCCAGAAATTGGAACCTGAGAGACATCAACTCTTTGTGAATCAAGCTACAGGAAAAAGGCCAGAGAATCCAACTGATGACAGACAAAGCATAGCTGCATCCTGCATGCATAGGTTAAGGTTAGTGTAG 2793 0.4114 MADASYVICSSSPPGGKFKDADEDAQFQETELVNDTLVLNSPFTEPQLENLNLNTELVEDSDPSENVESGPTCENGQEVVLDSEDDEMDNGRAASAVRGLADDGTSPAARIPSMHFQKRPVKPPFKQADSNGTAFSKAAIGEKGISVDTKMLNNIHSPEPGDSTQAALGFVDEYLSSSDMDLLQGIYHIKPTREKSLHVLSARGSLSLARKIKTQTQNREKEPFRWDGGDQDDKGAGIWCRKVNTASNIGSENQKEGGHLQSQGIRCAGVRCDDEIENMVQRHGIETKNESNSLKELDVQSSLMRENETPYSSVIHTEDMFGIGLDTQIAAEAMEALAFMPTTGCHFHDAHQPEKAPDGSLSDLIENKGHLKNLLHKQNSGLQSITKKSKKRKHTENQEPNTVLVETRKMMKSKSTIKGQSENNTTSPIHSELVSIEEVCSTGEYTSFQPATTESKNKNKSRRPRKKNQSIHHTERNNNVKADDTIRCKRKGADIEADPLKLGIRTKRLNLPTNLSRKTVKNSLNHQVEVSPQLSGSSSFLINDSPSWLYPKRARGKRKKANVQDNLDAPTILCIDGNESNVWSINSIERQNDEDKSCVDNSRCLSQGNSVQPGSADDTMKFESSLDKRSSLARVEISANKSSAQSSPEIPTTVSSSKDLIMSNNKRTCDEQHNKPCNKCLRKSPLLKELIRLGRRDMTFVRVLFSQHLDNNVVKRQKKVVARLNISTASSSMDATHFIADKFIRTKNMLEIMALGKLVVTHLWLESCGQANCFIDEKNYILRDVKKEKEIGFSMPVSLAQARQTPLLKGKRVYITPQVKPDKKVVATLVKAVQGQVVDESQVCAEKDDKFLDDLLILSCEEDYAICHHFLSRGTAVYSSELLLNGIIIQKLEPERHQLFVNQATGKRPENPTDDRQSIAASCMHRLRLV 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00548 930 MobiDBLite consensus disorder prediction 375 431 - -
Aip06g00548 930 SUPERFAMILY BRCT domain 695 798 IPR036420 -
Aip06g00548 930 ProSiteProfiles BRCT domain profile. 719 782 IPR001357 -
Aip06g00548 930 Gene3D BRCT domain 694 805 IPR036420 -
Aip06g00548 930 CDD BRCT_MDC1_rpt1 701 775 - -
Aip06g00548 930 MobiDBLite consensus disorder prediction 1 23 - -
Aip06g00548 930 Gene3D BRCT domain 806 906 IPR036420 -
Aip06g00548 930 MobiDBLite consensus disorder prediction 605 619 - -
Aip06g00548 930 CDD BRCT_PAXIP1_rpt6_like 807 893 - -
Aip06g00548 930 MobiDBLite consensus disorder prediction 446 483 - -
Aip06g00548 930 MobiDBLite consensus disorder prediction 414 431 - -
Aip06g00548 930 PANTHER BRCT DOMAIN-CONTAINING PROTEIN-RELATED 16 908 - -
Aip06g00548 930 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 16 908 - -
Aip06g00548 930 MobiDBLite consensus disorder prediction 637 657 - -
Aip06g00548 930 MobiDBLite consensus disorder prediction 605 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00548 Aip-Chr6 7139510 7143655 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00548 K14972 - gmx:102659913 979.933