Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00474 ATGGATGGGACCACATCATCTTTGGTGAATGATGCAGTGGATTGTTTTGCTGAAGAGGAAATTTTGGAGCCTAATATCTCAACATTGGTTATGAATTTCGAGAATGAGTCTGATCCTTTTGGAGCAGTCAGTAATCCGCTCTATCAGACTGCTACTTTTAAGCAGCCTAATGCAATAGAAAATGGTCCCTATGATTATACCAGAAGTGGAAATCCCACTCGAGATGCTTTAGAAAGTTTGTTGGCGAAACTTGATAAGGGGGATAGAGCCCTATGCTTCACCAGTGGAATGGCTGCTCTGAGTGCTGTTTCTCATCTTGTTCAAGCTGGTGAGGAAATTGTTGCTGGAGATGATCTATATGGTGGAACAGACAGGTTGCTGTCCCGAGTAACTCCAAAGAATGGCATTGTGGTCAAACGGGTAAATACAACTGATCTTAATGAGGTTGCATCTGCTATTGGACCCCGGACTAAGCTTGTGTGGCTTGAGAGCCCAACCAATCCTCGACTACAAATTACTGATATTCGAAAAATATCTGAGATGGCTCATGCACATGGTGCTCTGGTGTTGGTGGATAATAGTATAATGTCACCTGTGTTGTCTCGGCCATTAGAACTTGGAGCAGATATTGTTATGCACTCAGCTACCAAATTTATTTCTGGACATAGCGATATTATGGCTGGTGTGCTTGCTGTGAAAGATGAAAGGTTGGGAAAAGAGTTATATTTCTTGCAAAATGCAGAGGGTTCAGGCTTGGCTCCATTTGACTGTTGGCTCTGTATGCGAGGAATCAAGACGATGTCCCTGCGAGTTGAGAAACAACAGGATAATGCTCAGAAGATTGCCGAGTTCCTTGCCTCCCATCCTCTAGTGAAGAAAGTAAACTATGCTGGTCTGCCTGGTCATCCTGGACACGATTTACACTACTCGCAGGCAAAAGGTGCAGGATCTGTGCTTAGCTTTTTAACAGGTTCCCTGGCACTCTCAAAGCATATTGTTGAAACTACCAAGTACTTCAGCATAACTGTCAGTTTCGGAAGTGTGAAGTCCCTCATCAGTTTGCCGTGTTTCATGTCGCACGCAAGCATACCATCGGTGGTTCGTGAAGAAAGAGGCTTAACCGAAGATCTAGTGCGCATATCTGTGGGGATTGAGGATGTGAATGATCTCATTTCTGATCTAGACAATGCCCTTAGAACTGGCCCTGTGTAA 1212 0.4422 MDGTTSSLVNDAVDCFAEEEILEPNISTLVMNFENESDPFGAVSNPLYQTATFKQPNAIENGPYDYTRSGNPTRDALESLLAKLDKGDRALCFTSGMAALSAVSHLVQAGEEIVAGDDLYGGTDRLLSRVTPKNGIVVKRVNTTDLNEVASAIGPRTKLVWLESPTNPRLQITDIRKISEMAHAHGALVLVDNSIMSPVLSRPLELGADIVMHSATKFISGHSDIMAGVLAVKDERLGKELYFLQNAEGSGLAPFDCWLCMRGIKTMSLRVEKQQDNAQKIAEFLASHPLVKKVNYAGLPGHPGHDLHYSQAKGAGSVLSFLTGSLALSKHIVETTKYFSITVSFGSVKSLISLPCFMSHASIPSVVREERGLTEDLVRISVGIEDVNDLISDLDNALRTGPV 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00474 403 CDD CGS_like 41 399 IPR000277 GO:0019346|GO:0030170
Aip06g00474 403 Gene3D Aspartate Aminotransferase, domain 1 268 401 IPR015422 GO:0003824
Aip06g00474 403 TIGRFAM cysta_beta_ly_E: cystathionine beta-lyase 27 400 IPR006238 GO:0004121|GO:0071266
Aip06g00474 403 ProSitePatterns Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 209 223 IPR000277 GO:0019346|GO:0030170
Aip06g00474 403 PANTHER BNAC04G24570D PROTEIN 1 403 - -
Aip06g00474 403 PIRSF CGS 18 401 IPR000277 GO:0019346|GO:0030170
Aip06g00474 403 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 1 403 IPR000277 GO:0019346|GO:0030170
Aip06g00474 403 Pfam Cys/Met metabolism PLP-dependent enzyme 28 398 IPR000277 GO:0019346|GO:0030170
Aip06g00474 403 Gene3D - 25 267 IPR015421 GO:0003824
Aip06g00474 403 SUPERFAMILY PLP-dependent transferases 33 399 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00474 Aip-Chr6 5755693 5759697 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00474 K01760 - gmx:100812354 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00474 06 5755693 5759697 Aip06g00474 06 5755693 5759697 ECH