Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00470 ATGTCGACGGTGGTGGTTGTGACGGCAACGGTACTTGCACTATTGGCCGTCACCTTCGCCATTTTCAAGCCCCACCAGACCCTCTTTGCACCGCCGCAGCTTCAAGCTTCCAAGGATGTCCTACACGCCGCGCGCCTCCTCCACGTCACCGGAGCCCTTGGTCCTGAGAGTCTCGTGTTCGATCGTCACGGTGGAGGGCCATACACCGGCGTCGCCGATGGCCGGATTCTAAAGTGGGAAGGAGATGAAGTTGGTTGGACTGAGTTTGCTGTCACCTCTTCCAATAGGACGGAGTGTGTGCGCCCATTTGCACCGGAGTTGGAGCATATTTGTGGGCGGCCATTAGGACTAAAGTTTGACAAGAAAAGTGGAGATCTGTATATAGCTGATGCTTACCTAGGCCTAAAAGTAGTAGGACCCGAAGGGGGTTTGGCCATCCAAGTCGTAACGGAAGCTGAAGGTCAGCCGTTTCACTTCACCAATGACATGGATATCAGCGAAGATGAAGACGTAATCTACTTCACTGATTCTAGCAGTGCCTTTCCCAGAAGGCAATTTATGTTTGTGCTCCTTCATGGAGACAAGACTGGCAGGTTCTTGAAATATAACAAATCAACAAAAGAAGTGTCTGTTTTATTACGCGGCCTTGCTTTTCCAAACGGTGTTGCTTTGAGCAAAGACGGCTCGTTCGTGCTCATAGCAGAAACCACTACTGGCAAGATCCTAAGACTCTGGCTTCATGGACCTAATGCCGGTGAAGTCAATACTTTCGCAGTGGTTCCAGGATTCCCTGACAACATAAGGAGAAATTCGGAAGGCGAGTTTTGGGTGGCTTTGCACGCAAAGGGAACTCCTTTCTCGAGATGGGTTACTTCTAATGCATGGATTGGACAGACATTGTTGAAGGTCGGATTCAACTTCAAGCAGTTGCATTCATCGTTTGCCGGGTGGAAGCCTCATGCTACTGCTGTAAAGCTAAGTGAGAAAGGTGAGATATTAGAAGTGTTGGAAGATTGTGAAGGGAAGAAGTTAAAGTTCATAAGTGAAGTGGAAGAGAAAGATGGGAAGCTATGGATTGCATCAGTGTTAATGCCTTTTATTGGCATATATGATTTATGA 1119 0.4817 MSTVVVVTATVLALLAVTFAIFKPHQTLFAPPQLQASKDVLHAARLLHVTGALGPESLVFDRHGGGPYTGVADGRILKWEGDEVGWTEFAVTSSNRTECVRPFAPELEHICGRPLGLKFDKKSGDLYIADAYLGLKVVGPEGGLAIQVVTEAEGQPFHFTNDMDISEDEDVIYFTDSSSAFPRRQFMFVLLHGDKTGRFLKYNKSTKEVSVLLRGLAFPNGVALSKDGSFVLIAETTTGKILRLWLHGPNAGEVNTFAVVPGFPDNIRRNSEGEFWVALHAKGTPFSRWVTSNAWIGQTLLKVGFNFKQLHSSFAGWKPHATAVKLSEKGEILEVLEDCEGKKLKFISEVEEKDGKLWIASVLMPFIGIYDL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00470 372 PANTHER STRICTOSIDINE SYNTHASE-RELATED 3 370 - -
Aip06g00470 372 SUPERFAMILY Calcium-dependent phosphotriesterase 19 371 - -
Aip06g00470 372 Pfam Strictosidine synthase-like, N-terminal 39 79 - -
Aip06g00470 372 Pfam Strictosidine synthase 161 248 IPR018119 GO:0009058|GO:0016844
Aip06g00470 372 Gene3D - 36 372 IPR011042 -
Aip06g00470 372 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 10 3 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00470 Aip-Chr6 5664074 5666986 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00470 - - lang:109348186 627.861