Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00460 ATGGGATCCGAAAGAGGGTCTCCATTTTATGTGGTTGACTTGAGAGATGAAAACATGAAGGCGGGCAGCGAGGCATGGCGGTCGGCGTGCCGTGTGGTGAGGACTGCGCTGGAGGAGCACGGCTGCTTCGTGGCGCGGTTCGACAAGGTTAGCCAGGAGCTTTGCAACTCCGTTGTGACGTGTTTGAAGGAACTGTTTAGCCTGCCATTGGAGACCAAGAAACAAAAGACAAATGAGAAGCCATTACATGGCTACATAGGAAGTGTGCCATGGCTTCCATTGTATGAATCTATCGGCATTGATAATCCTTTGTCCATGGATGCAGTGCAAAATTTCGCCCACTTTATGTGGCCCCATGGAAACCGTACTTTTTGTGAAAGCATCAATGAGTATGCGAAAGTGATGGCAGAATTAGAGGTAGTGGCAAGGAGAATGGTGTTTGAGAGCTATGGTATGAAGATGGAACGATACGAATCATTGATAGAAGAAACAAGCGAGTATGTGTTTCGTTGCTTGGAGTACAAGCCACGAAGCGAGGGCGTAGATGAGAATGTGTTAGGGTTGGAGCCTCACACTGACTTGTCAATCATATCAGTGCTTCATCCCATTAACAATCTCAATGGCTTGCAAGTTAAGACCAGCCATGTTTCTGATGATCAAGAACAATGGACACCCATTGAAGCCTCCCCCAACTCCTTTGTCGTCATGGCTGGTGACGCACTCCAGGTGTGGAGTAATGGAAGGATAAAATCATGTTTACACAGAGTTGAAATGAAGGAGAAGAAAGCAAGATACGCAACAGGAATATTCTCATTTTGTGGCAACATATTGGAGATACCAGAGGAAATAATGGTTGATGAAGAACACCCCTTGCGTTATAAACCAGCATTCCACCATTATGATTACCTTCGATTCTTTGACCAGCACAGAATCAGACAACCTCAAACTCGAATGGATGCCTATTGTGGAATATAA 975 0.4554 MGSERGSPFYVVDLRDENMKAGSEAWRSACRVVRTALEEHGCFVARFDKVSQELCNSVVTCLKELFSLPLETKKQKTNEKPLHGYIGSVPWLPLYESIGIDNPLSMDAVQNFAHFMWPHGNRTFCESINEYAKVMAELEVVARRMVFESYGMKMERYESLIEETSEYVFRCLEYKPRSEGVDENVLGLEPHTDLSIISVLHPINNLNGLQVKTSHVSDDQEQWTPIEASPNSFVVMAGDALQVWSNGRIKSCLHRVEMKEKKARYATGIFSFCGNILEIPEEIMVDEEHPLRYKPAFHHYDYLRFFDQHRIRQPQTRMDAYCGI 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00460 324 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 323 - -
Aip06g00460 324 Pfam 2OG-Fe(II) oxygenase superfamily 174 267 IPR044861 -
Aip06g00460 324 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 9 323 - -
Aip06g00460 324 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 164 274 IPR005123 -
Aip06g00460 324 SUPERFAMILY Clavaminate synthase-like 11 309 - -
Aip06g00460 324 Gene3D - 10 322 IPR027443 -
Aip06g00460 324 Pfam non-haem dioxygenase in morphine synthesis N-terminal 13 87 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00460 Aip-Chr6 5465696 5468066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00460 126 294 Glycosyltransferase AT5G59530 27.586 8.03e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00460 - - gmx:100775440 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01695 02 71392706 71396305 Aip06g00460 06 5465696 5468066 PCT