Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00440 ATGTCTTCAAAACATGTTATTATTGTTATTATTACTCATCTATTTACAAAATTCTTAAAAACTTTCTTACTCCTTATTAGTTTCATACTCCACAAAGCAGATTCCGGCTACAACAACAATTCTATTGGAACATCAATATTTCAACGACCTTATCATTATGATCAGATTGTATCTTCGTTGCAAAAACTCCCTCTAGACGGCTCCTTAAGCTTGAGTAACAACGACGCGGTCGCCAGTGACTTTGGAAACATATACCATTTCCCTCCTCTAGCAGTCCTTAACCCGGTATCAGTATCCGACATATCACGTGCCATAAAGCACGTGACGGAATTATCTGAACCGGGTCTGAAGGTCGCTGCTAGAGGACACGGACATTCCCTCCAAGGGCAGTCACAAGCAGAAGGAGGGATAGTGATCAACATGGAGTCATTAGCTGAAAAAACAGCAGCAGTAGTGGTAGTTAACAATGGAGAATTTGTTCCATATGTGGATGTTTCAGCGGGTGAGTTATGGATTAACATTCTGCATGAGACTCTTAAGCATGGTTTAGCACCGAAATCTTGGACGGATTATCTTCATCTCACTGTTGGTGGAACTCTATCAAATGCTGGAATAAGTGGTCAAGCTTTCAGGCATGGACCCCAGATCAATAACGTCTTTCAGCTTGAAGTTGTTACAGGGAAAGGAGAGGTGGTTACATGCTCAGAGACAAGAAACACAGAGCTTTATTACAGTGTTCTTGGAGGGCTTGGCCAATTTGGAATCATCACTAGGGCAAGGATTTCTCTTGAAGCAGCACCTAAGACGGTGAAATGGATTAGGATGCTGTACTCAGAGTTTTCAATGTTTGCAAGGGACCAAGAGTATTTGATATCTCTTGAGAACACATTTGATTATATTGAAGGATTTGTGATCATAAATAGAACTGGTATCCTTAATAATTGGAGATCTTCTTTCAACCCCAGAGACCCACTTCAGGCCAGCCAATTCATTTCAGATGGAAGAACCTTCTATTGTCTTGAGGTGGCAAAATATTTCAACCCAGATGAAACTCAATTCATGAACCAGATAGTTGAGAATTTGTTGTCAGAGCTGAGTTACATTCCATGGACACTCTTCCAATCAGAAGTTTCTTACGTGCAATTCCTAGATAGAGTGCATGTTTCTGAGAAACAGTTAAGATCAAAGGGATTATGGGAAGTTCCACACCCTTGGCTAAACCTTCTAATTCCAAGGACTCACATTCATCACTTTGCTCAAGAGGTCTTTGGCAATATCCTCAAAGACACAAGCAATGGCCCCATACTCATCTACCCTGTCAACCAAACAAGGTGGAACAGGAAAACATCTTTGGTAACGCCAGAGGAGGATATATTTTACCTAGTGGCATTTTTATCTTCAGCAATGCCATTAGCAAGAGGCTCAGAGAGCTTAGAACACATCCTAACACAAAACAAAAGGATCCTAGAATTTTGCACAAATGCCAAGCTTGGAGTGAAGCAGTATCTCCCACATTACACCACACAGGAAGAGTGGAAAGCACACTTTGGGTCAAAATGGGAAGCATTTGTGCAAAGAAAAACAGCATATGACCCACTAGCACTGCTTGCCCCTGGCCAGAGAATCTTTCAAAAGGCATTGTCTACCTCTTGTTAG 1656 0.4143 MSSKHVIIVIITHLFTKFLKTFLLLISFILHKADSGYNNNSIGTSIFQRPYHYDQIVSSLQKLPLDGSLSLSNNDAVASDFGNIYHFPPLAVLNPVSVSDISRAIKHVTELSEPGLKVAARGHGHSLQGQSQAEGGIVINMESLAEKTAAVVVVNNGEFVPYVDVSAGELWINILHETLKHGLAPKSWTDYLHLTVGGTLSNAGISGQAFRHGPQINNVFQLEVVTGKGEVVTCSETRNTELYYSVLGGLGQFGIITRARISLEAAPKTVKWIRMLYSEFSMFARDQEYLISLENTFDYIEGFVIINRTGILNNWRSSFNPRDPLQASQFISDGRTFYCLEVAKYFNPDETQFMNQIVENLLSELSYIPWTLFQSEVSYVQFLDRVHVSEKQLRSKGLWEVPHPWLNLLIPRTHIHHFAQEVFGNILKDTSNGPILIYPVNQTRWNRKTSLVTPEEDIFYLVAFLSSAMPLARGSESLEHILTQNKRILEFCTNAKLGVKQYLPHYTTQEEWKAHFGSKWEAFVQRKTAYDPLALLAPGQRIFQKALSTSC 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00440 551 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 267 543 IPR015345 GO:0009690|GO:0019139|GO:0050660
Aip06g00440 551 Pfam FAD binding domain 89 235 IPR006094 GO:0050660
Aip06g00440 551 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 10 548 - -
Aip06g00440 551 SUPERFAMILY FAD-binding/transporter-associated domain-like 76 263 IPR036318 GO:0050660
Aip06g00440 551 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 89 125 IPR006093 GO:0016491
Aip06g00440 551 Gene3D - 75 543 IPR016167 -
Aip06g00440 551 Gene3D - 269 502 IPR016170 -
Aip06g00440 551 PANTHER GULONOLACTONE OXIDASE 10 548 - -
Aip06g00440 551 SUPERFAMILY FAD-linked oxidases, C-terminal domain 267 543 IPR016164 GO:0003824|GO:0050660
Aip06g00440 551 Gene3D - 141 268 IPR016169 -
Aip06g00440 551 ProSiteProfiles PCMH-type FAD-binding domain profile. 85 266 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00440 Aip-Chr6 5151469 5154847 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00440 K00279 - gmx:100777568 802.357