Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00429 ATGTCTGATGCGTTTTGCTCCGACTGCAAGCGGCAGACGGAGGTGGTTTTCGACCACTCCGCCGGCGACACCGTCTGCTCCGAGTGCGGTCTCGTTCTCGAGTCCCACTCCATTGACGAGACCTCGGAGTGGAGGACCTTTGCTAACGAGTCCGGGGATAACGATCCGGTTCGTCCCAACGGCGCCAGCGGCGAGTTGTTCTCGTCTTCCCTTGGCCGCTGGCAGAACCGTGGCTCTAATCCTGATCGCGGTCTCATCCTCGCTTTCAAGACAATCGCCACTATGTCCGATAGGTATCGGTTTTGCGCGCTTGTTGATCGAGCTAATGAGATATACAAGCGGGTTGAAGATCAGAAGTCTAGTAGAGGAAGAAATCAGGATGCATTATTGGCTGCTTGCCTCTACATTGCTTGTAGACAGGAGGACAAGCCACGCACTGTAAAGGAAATTTGCTCTGTTGCCAATGGAGCGTCAAAGAAGGAAATTGGCCGAGCAAAAGAATACATAGTGAAACAACTGGGTTTGGAGAAAGGTCAATCTGTGGAGATGGGAACAATACATGCTGGTGACTTTATGAGGCGATTTTGTTCTAATCTTGGTATGAATAATCAAGCTGTCAAAGCTGCTCAAGAAGCTGTTCAGAGATCAGAAGAGTTTGATATACGGTGA 669 0.5007 MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRPNGASGELFSSSLGRWQNRGSNPDRGLILAFKTIATMSDRYRFCALVDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGASKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQRSEEFDIR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00429 222 Gene3D - 187 222 - -
Aip06g00429 222 ProSitePatterns Transcription factor TFIIB repeat signature. 123 138 IPR023486 -
Aip06g00429 222 SUPERFAMILY Cyclin-like 104 175 IPR036915 -
Aip06g00429 222 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 58 222 IPR000812 GO:0006352|GO:0070897
Aip06g00429 222 Pfam TFIIB zinc-binding 6 47 IPR013137 -
Aip06g00429 222 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 3 58 IPR000812 GO:0006352|GO:0070897
Aip06g00429 222 Pfam Transcription factor TFIIB repeat 83 164 IPR013150 GO:0017025
Aip06g00429 222 PRINTS Transcription initiation factor IIB signature 158 173 IPR000812 GO:0006352|GO:0070897
Aip06g00429 222 PRINTS Transcription initiation factor IIB signature 131 150 IPR000812 GO:0006352|GO:0070897
Aip06g00429 222 PRINTS Transcription initiation factor IIB signature 191 209 IPR000812 GO:0006352|GO:0070897
Aip06g00429 222 PRINTS Transcription initiation factor IIB signature 19 39 IPR000812 GO:0006352|GO:0070897
Aip06g00429 222 PRINTS Transcription initiation factor IIB signature 41 54 IPR000812 GO:0006352|GO:0070897
Aip06g00429 222 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 3 58 - -
Aip06g00429 222 Gene3D - 66 174 - -
Aip06g00429 222 Gene3D - 1 51 - -
Aip06g00429 222 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 58 222 - -
Aip06g00429 222 SUPERFAMILY Cyclin-like 186 220 IPR036915 -
Aip06g00429 222 SMART cyclin_7 90 171 IPR013763 -
Aip06g00429 222 ProSiteProfiles Zinc finger TFIIB-type profile. 2 34 IPR013137 -
Aip06g00429 222 SUPERFAMILY Zinc beta-ribbon 4 50 - -
Aip06g00429 222 CDD CYCLIN 84 164 IPR013763 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00429 K03124 - fve:101305780 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00429 06 5037791 5042064 Aip06g00429 06 5037791 5042064 ECH