Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00421 ATGGCTGCCGCCACACGCGCCATACGCCACCGCCTCAAACTCTCCGACCTCGTCATCGAAGTCCGCGACGCCCGCATCCCTCTCTCCTCCGCCAACTCCGACCTCCAGCCTCACCTCTCCGGCAAACGCCGCGTCGTCGCTCTCAACAAGAAAGACCTCGCCAACCCTAACATCATGCACAAATGGGTGGATTATTTTGCGAGGTGCAAGCAGGATTGTATTCCGATAAATGCGCATAGCAAGAGTTCAGTGAAGAAGCTTCTGGAGCTTGCGGAGTTGAAGCTGAAGGAAGTGATTTCGAGGGAACCTACTCTGCTGGTTATGGTGGTTGGTGTTCCTAATGTTGGAAAATCTGCGTTGATTAACTCCATTCATCAAATTGCGCAGTCTCGCTTTCCTGTGCAGGAGAAGATGAAGCGAGCTGCTGTAGGTCCACTACCTGGTGTTACCCAAGATATTGCTGGATTTAAGATAGCACAAAAACCCAGCATATATGTCCTAGATACCCCAGGGGTGCTTGTTCCAAGTATCTCAGACATAGAGACAGGGTTAAGGCTGGCTCTTGCAGGTTCTGTGAAAGATTCAGTGGTGGGTGAGGAGCGTATCGCACAATACTTACTGGCAGTTTTGGATACCCGGGGGACTCCACTTCACTGGAAACACCTAAATAATAGGAGAATAGATGGTATTGAATATGATGCTGAAGAAAAACCTGACTATAGTCTGAAAAATCTAAAGCCAAAGACAAGAAATCTACCAAATAAATCTCACTTGATTTATGTTGAGGACCTTGTAATGGAAGTTCAGCGTGCACTGTATTCAACGCTAACAGAATTCGACGGCAATGTAGAAGATGAAAATGACTTAGAGGGCCTCATTGACCTGCAGTTTGGTGCACTGCAGAAAGCAATGAAAATTCCTCACAAGGCATCAGAAGCAAGGTTGATGGTATCCAAGAAGTTTCTCACTTTATTTAGAGCTGGTAAACTTGGACCTTTCATTCTTGATGATGTTCCTGTATCATGA 1026 0.4659 MAAATRAIRHRLKLSDLVIEVRDARIPLSSANSDLQPHLSGKRRVVALNKKDLANPNIMHKWVDYFARCKQDCIPINAHSKSSVKKLLELAELKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIAQSRFPVQEKMKRAAVGPLPGVTQDIAGFKIAQKPSIYVLDTPGVLVPSISDIETGLRLALAGSVKDSVVGEERIAQYLLAVLDTRGTPLHWKHLNNRRIDGIEYDAEEKPDYSLKNLKPKTRNLPNKSHLIYVEDLVMEVQRALYSTLTEFDGNVEDENDLEGLIDLQFGALQKAMKIPHKASEARLMVSKKFLTLFRAGKLGPFILDDVPVS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00421 341 Pfam 50S ribosome-binding GTPase 107 220 IPR006073 GO:0005525
Aip06g00421 341 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 4 175 IPR030378 GO:0005525
Aip06g00421 341 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 186 IPR027417 -
Aip06g00421 341 PIRSF MG442 259 339 IPR016478 -
Aip06g00421 341 PIRSF MG442 1 274 IPR016478 -
Aip06g00421 341 Gene3D - 3 176 IPR027417 -
Aip06g00421 341 PANTHER SHORT INTEGUMENTS 2, MITOCHONDRIAL-LIKE 1 340 - -
Aip06g00421 341 Gene3D - 178 246 IPR023179 -
Aip06g00421 341 CDD YlqF 1 173 - -
Aip06g00421 341 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 1 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00421 Aip-Chr6 4967733 4970324 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00421 K19828 - gmx:100785615 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00421 06 4967733 4970324 Aip06g00421 06 4967733 4970324 ECH