Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00406 ATGGCGTGTAACGGCTCTGGTTGCCAATCCGGTTGCTACAAAGACGAAGAAGAACCGAAGCGTGAGAATCTAGCAGTTCCAACAAAAACCGATTCAGCGAGCAATGGGAACATCTGCGTCAAGTGCAAGCTGAACGACTCCGTTTCGGGTTACGGCGGCATCGACGATGGTCGCTTCTGCGCTGATTGCTTCAGGAGCAACCTGTTTGGGAAGTTCAGATACGCCGTCACCTCGAACGCCATGATCTCTCCCACCGATAAGGTCCTTGTTGCATTCTCAGGTGGCCCTTCTTCAAGGATAGCTTTGCAGTATGTGCATGATTTGCAAGAGAGGGCACAGAAGAATTTTGATGCCTGTAGAGATAGGTCGTTGCCTGTGTTTGGTGTTGGAGTGGTGTTTATAGATGAGAGTGCTGTTGTGCCGATTCCTTCTGGTGAGATGGATGAGGCGGTTGGATTTGTTTCTTCGGTTGTTTCGTGTTTAGCCCCGCCAAAGAAGGAGTTGCATGTTGTTCCTATTGAGACAATTTACTCGTCCGATTCTAGTGACGGAAAGGAGAGGCTGTTAAAGATTCTGAATGCTGTGAGTGATCCCACTGGAAGGGAGGATTTGTTGGTTAATATTCGCATGTTGGCACTTCAAAAGGTTGCTTCTGAATTTGGTTATAACAGACTTGTTCTAGGATCATGCATTTCAAGAATTGCTTCTCATGTCATTTCAGCCACTGTGAAGGGTCAGGGATATTCATTACCTGCAGATATACAGTATGTTGATGCTCGATGGGAAATTCCAGTTGTGCTTCCTCTACGTGATTGTTTCGCTCAAGAGATCAACATGCTTTGCCGCCTTGATGGTCTAAAGACTTTAAAGTTGTCTACAAGTCCAAGCTCTACCATCAATGGCTTGGTCTCATCATTTGTACAATTATTGCAGGAAGAAAACCCATCTAGAGAGAGCACAATTGTGAGAACAGCTGGGAAACTCATTCCTTTCCAATTTAACAAGATTCCCGAGATCACTGATGGTCATGTTCCCTTGGCAACTCGAAGACGCCAAAAGAGATATAATCTCAAATCGAATGAATCTGTTTCCTCGGAATCTTTCTGTCCTCTCTGCAATAGCCCACTTGATAAGTCTGAGATTGTTAATCGAAGCAACCATGATAATGGTAGCACTGGTGAATTTTTTTATGCTGCTTGCTGTTCTAGTTGTCAGTATCAGATACTTCCAAGAGATTCCACGACAATGGAGCAATTTTATACGGATTTACCCCAATCTATAATTTCCAGATCAGAGGAAGCAAACAATTGTAACTTGAGTCTGCTAAGGGAACAAATACAAGATTGCTTGCTTTCAGATGATGAAGAAGAAACTTAG 1377 0.4394 MACNGSGCQSGCYKDEEEPKRENLAVPTKTDSASNGNICVKCKLNDSVSGYGGIDDGRFCADCFRSNLFGKFRYAVTSNAMISPTDKVLVAFSGGPSSRIALQYVHDLQERAQKNFDACRDRSLPVFGVGVVFIDESAVVPIPSGEMDEAVGFVSSVVSCLAPPKKELHVVPIETIYSSDSSDGKERLLKILNAVSDPTGREDLLVNIRMLALQKVASEFGYNRLVLGSCISRIASHVISATVKGQGYSLPADIQYVDARWEIPVVLPLRDCFAQEINMLCRLDGLKTLKLSTSPSSTINGLVSSFVQLLQEENPSRESTIVRTAGKLIPFQFNKIPEITDGHVPLATRRRQKRYNLKSNESVSSESFCPLCNSPLDKSEIVNRSNHDNGSTGEFFYAACCSSCQYQILPRDSTTMEQFYTDLPQSIISRSEEANNCNLSLLREQIQDCLLSDDEEET 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00406 458 PANTHER CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 31 452 IPR019407 GO:0000049|GO:0002098|GO:0034227
Aip06g00406 458 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 62 289 - -
Aip06g00406 458 Hamap Cytoplasmic tRNA 2-thiolation protein 2 [CTU2]. 29 412 IPR019407 GO:0000049|GO:0002098|GO:0034227
Aip06g00406 458 Pfam Cytoplasmic tRNA 2-thiolation protein 2 298 380 IPR019407 GO:0000049|GO:0002098|GO:0034227
Aip06g00406 458 Gene3D HUPs 38 393 IPR014729 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00406 K14169 - gmx:100804325 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00406 06 4777944 4780631 Aip06g00406 06 4777944 4780631 ECH