LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip06g00400	ATGGCTGAATCATTCATCTTCAGCATCGCTGAATCACTCATAACTAAGCTTGCTTCTCGTGCATACCAAGAAGCATCTCAGGTGGTTGGTGTCTACGATGACCTCCAAGACCTGAAAACCAatgttgcaaatcgatatttaagtgaattaatttcgagatcttttcttgaaaatgtttgtgacttaggcacatactattactttaatatacatgatttagtgcatgatcttgcaCTATATGTTGCAAAAGATGAATGCCTAGTAATTAGTTCTGAGAGTCAAAATATACCAAAAAATGTTCTCCATATATCGTTTTTTGAATTTGATATGTTTCTCAAATCCTTCAAACCAAGTTTGTTAGGTGTGAGAACCATTGCAGTTCCAACTGAAGAACATATAGGTATAGGAGACAATAATGAAGATTTGTTCCCTACATGGGTGTTAAATTGCAAATACTTGCGATATTTGGATCTAGCTGATTCTACATTTGAGATTCTACCTCGATCAATCAGCAAGTTGAAACATTTAAGATATCTTTCACTCAGGGATAACGGAAGAGTAAAGAAACTCCCTGCGTCTATTTGCAACCTCCAAAATTTGGAAGAGTTGAATCTTAGTGGTTGTGTGGAGCTCCAAACTTTGCCAGAAAAGTTACGAAACTTGATCAATCTGCGAAGAATATCGATAACCACAAAGCAATTTGTCTTGCCAGAGGATGACCTTGCAAATTTGTGTTTGCTTGAACATTTACATATTTATGAATGTGACAACCTGGAATCCACGTTTGTAGGGGTAAAGTTGCCTACCCTTCGATTTTTGTGGATTATGAGGTGTAAGAATTTGAAGTCTTTGCCACTTGACAAACACCATTTTCCTCAATTAGAGCAATTCGTTGTCGATGAATGTGTAAAGTTTGAATTGTCAGATGGACACGAGGACATGAACTCTGTCTTGAGGTTGAAGACACTTTTCTTTTGCATGATGGTGAACTTCCCTCCTTCTCTCCACGGATATGCAAACACATTACAAACTTTGGTATTTTTAAGGTGCTATGAATTGGAGGCGCTTCCTGAATGGCTGTTGAACATGACTTCTTTGAAATTTCTTCATATCTGGAGTTGTCCAAGGTTGTTGTCTCTCCCTAGTGGCATCCACTGTCTTAAAGCCCTTGAAGTTTTGGGAATCCAACGTTGCCCTAGATTGTACAGAAAGTACCAGCCACATGTTGGAGAGTATTGGCACCAAATATCCCACATCAAGCATATTCAAATCTTGCAATAG	1281	0.3552	MAESFIFSIAESLITKLASRAYQEASQVVGVYDDLQDLKTNVANRYLSELISRSFLENVCDLGTYYYFNIHDLVHDLALYVAKDECLVISSESQNIPKNVLHISFFEFDMFLKSFKPSLLGVRTIAVPTEEHIGIGDNNEDLFPTWVLNCKYLRYLDLADSTFEILPRSISKLKHLRYLSLRDNGRVKKLPASICNLQNLEELNLSGCVELQTLPEKLRNLINLRRISITTKQFVLPEDDLANLCLLEHLHIYECDNLESTFVGVKLPTLRFLWIMRCKNLKSLPLDKHHFPQLEQFVVDECVKFELSDGHEDMNSVLRLKTLFFCMMVNFPPSLHGYANTLQTLVFLRCYELEALPEWLLNMTSLKFLHIWSCPRLLSLPSGIHCLKALEVLGIQRCPRLYRKYQPHVGEYWHQISHIKHIQILQ	426

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip06g00400	426	Gene3D	Ribonuclease Inhibitor	92	311	IPR032675	-
	Aip06g00400	426	Gene3D	Ribonuclease Inhibitor	312	410	IPR032675	-
	Aip06g00400	426	PANTHER	NBS-LRR DISEASE RESISTANCE PROTEIN	35	314	-	-
	Aip06g00400	426	PANTHER	DISEASE RESISTANCE PROTEIN RP	35	314	IPR044974	GO:0006952
	Aip06g00400	426	SUPERFAMILY	L domain-like	70	402	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip06g00400	Aip-Chr6	4724237	4737774	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip06g00400	100	373	Receptor kinase-like Gene Family	AT1G75640	24.199	2.02e-09	58.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip06g00400	-		-	gmx:100777049	380.948