Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00398 ATGGCTGAATCATTCATCTTCAGCATCGCTGAATCACTCATAACTAAGCTTGCTTCTCGTGCATACCAAGAAGCATCTCAGGTGGTTGGTGTCTACGATGACCTCCAAGACTTGAAAACCAGTCTCTCATATGTGAAAGCTGTGCTGTTGGATGCTGAGCAGAAGCAGGAGCAGAACCACGAACTGCGAGAGTGGCTGAAGCAGATCAAACTCATCTTCTATGATGCTGAGAACGTGCTTGATCAAGTTAACTGTGAAACACTGCGCAAGCAAGTCATCAGAGACTACGGCACTCCCAAGGACAAGGTAGGCCGCTTCTTCTCGAGTTCTAATCCACTTGTGTTTCGTTATAAGCTTGCTCTTCAGATCAAAGATATTAGGATGAGATTAGACAGAGTCGCGGCTGATAGGGATAAGTTTGGGCTTCAAGTAATTGATGTTGATAGGCGAGTTGTGCATAGCAGGGAAATGACTTACTCCCATGTTGTTGAGTCTGATGTCATAGGACGTGCTCATGATAAAGAAATGATTGTAAAGCTCTTGATGGAACCGAGTCTTGACAACAATGGTGACTCCAAACATATCtccgtcattcccattgtgggaattggagTATATGTTGCAAAAGATGTGTGCCAATTGGTCAATTCAAACACGCAGGATATATCAGAAAATGTGCTGCATTTGTCTTTTGTTGAGAATGGTTTGCCTTTCAATTCCATCAAGACAAGCTTACAAGGTGTGAGAAGCATTCTGTTTCCAGTTGACAATCAGGGAGCCAGTGAAGCTTTCTTGGATGCATGGGTGTTAAACTGCAAATACCTGCGATATTTGGATTTAAGTGATTCTACATGTGAGACTCTGCCTGAGTCAATTGGTAAGTTGAAACATTTAAGATATATTTCTCTTCAGGGTAATACAAGAATAAAGAGGCTCCCTAATTCTATTTGCAAGCTGCAACATTTGCAAGTTTTGCTTCTTGATAGGTGTTCAAATCTGGAAACTTTACCGAAAAAGATAAGAAAGTTGATCAGTCTGCAAAGATTGGATATAACCACAAAGCAATCTATTTTGCCAGAGAGTGACATTGCAAAGTTGAATTGTCTTGAACATTTGTCTGTCGAAAATTGTGATAATTTGAAGTCCTTGTTTGTTGAGACAAGATTGCCTACACTTCGAACTTTGCAAGTTCGTGGCTGTGCGAATCTAAAGTCTTTGCCACTTGATACTCAGCATTTTCCTCAGTTAGAAACTTTGGGAATCAGCAGTGTTGGCAATGAAGATTGGCTTCATAGATCAGAGGATACTAATGCTGTCTTGAGGTTAAAAACCATTGTTCTTTTTGAAATGGCAACATTGCCTCATTCTCTCCAACAATATGCAAGCACGTTACAAGGTTTGATGATTTCACGTTGCTACGAGCTGGAGGTACTGCCCGAATGGCTGTGGAATCTGAGTTCTTTGAAATTTCTTTATATCTCCCGGTGTCCGAAATTGAAGTCTCTTTCCAGTGATATCCACCGTCTAACAAGTCTGCAAGTTTTGCGAATCATAAATTGCCATGAGTTATATAGAAAATACGAGCCACAAGTTGGAGAGTGCTGGCCCATGATATCTCACATCAAGCATACTGACATTAGGAACACATGGGAATAG 1656 0.4028 MAESFIFSIAESLITKLASRAYQEASQVVGVYDDLQDLKTSLSYVKAVLLDAEQKQEQNHELREWLKQIKLIFYDAENVLDQVNCETLRKQVIRDYGTPKDKVGRFFSSSNPLVFRYKLALQIKDIRMRLDRVAADRDKFGLQVIDVDRRVVHSREMTYSHVVESDVIGRAHDKEMIVKLLMEPSLDNNGDSKHISVIPIVGIGVYVAKDVCQLVNSNTQDISENVLHLSFVENGLPFNSIKTSLQGVRSILFPVDNQGASEAFLDAWVLNCKYLRYLDLSDSTCETLPESIGKLKHLRYISLQGNTRIKRLPNSICKLQHLQVLLLDRCSNLETLPKKIRKLISLQRLDITTKQSILPESDIAKLNCLEHLSVENCDNLKSLFVETRLPTLRTLQVRGCANLKSLPLDTQHFPQLETLGISSVGNEDWLHRSEDTNAVLRLKTIVLFEMATLPHSLQQYASTLQGLMISRCYELEVLPEWLWNLSSLKFLYISRCPKLKSLSSDIHRLTSLQVLRIINCHELYRKYEPQVGECWPMISHIKHTDIRNTWE 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00398 551 Pfam Rx N-terminal domain 11 98 IPR041118 -
Aip06g00398 551 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 362 523 - -
Aip06g00398 551 CDD RX-CC_like 2 134 IPR038005 -
Aip06g00398 551 Gene3D Ribonuclease Inhibitor 449 549 IPR032675 -
Aip06g00398 551 SUPERFAMILY L domain-like 220 524 - -
Aip06g00398 551 Gene3D Ribonuclease Inhibitor 255 447 IPR032675 -
Aip06g00398 551 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 270 381 - -
Aip06g00398 551 PANTHER - 362 523 - -
Aip06g00398 551 PANTHER - 270 381 - -
Aip06g00398 551 Gene3D - 10 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00398 Aip-Chr6 4707565 4710147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00398 275 494 Miscellaneous Gene Families AT4G39270 30.045 7.90e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00398 - - aip:110262460 630.557