Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00397 ATGGCTGAATCATTCATCTTCAGCATCGCTGAATCACTCACTGCCAAGCTCGCTTCTCGTGCATATGAAGAAGCGTCTCGGGTGGTTGGTGTCTATGATGACCTTCAAGACTTGAAAAGCAGTCTCTCATATGTGAAAGCTGTGCTGTTGGATGCTGAGCAGAAGCAGGAGCGGAGCCACGAGCTGCGGGAGTGGCTGAAGCAGATCAAACTCATCTTCTATGATGCTGAGAACGTGCTTGATCAAGTTGACTGCCAAACATTGCGCAAGCAAGTCGTCAGAGCCTATGGTACTCCTAAAGACAAGGTAGGTCGCTTCTTCTCGAGTTCTAATCCACTTGTGTTTCGCTGGAAGATTGCTCAGCAGATCAAAGATATTACGCAGAGATTAGACAGAGTTGCGGCCAATAGAGATAAGTTTGGGCTTCAAACAATTGCAGTTGATAGGCGAGTTGTGCATAGGAGAGAAATGACTTACTCCCATGTTATTGAGTCTGATGTCATAggaagggatcacgataaagagaagatcataaagctcttgatggaaccgagtcttgacaacaacgatggctctaaacatatctctgtgattcccattgtgggaattggagTATACGTTTCAAAAGATGTGTGTCAATTGGTTAGTTCAAACACTCAGGACATACCAGAAAATGTGCTGCATTTGTCTTTTGTTGAGAATGGTTTGCCTTACAATTCCATCAAGACAAGCTTACAAGGTGTGAGAAGCATTCTATTTCCAGTCGACAATCAGGGAGCCAGTGAAGCTTTCTTGAATGCATGGGTGTCAAACTGCAGATACCTGCGATATTTGGATTTAAGTAATTCTACATGTGAGACTTTGCCTGAGTCAATTGAAAAGTTAAGAAAGTTGATCAGCCTGCAAAGATTGGAGATAACCACAAAGCAATCTATTTTGCCAGAGAGTGACATTGCAAAGTTGAATTGTCTTGAATATTTGTGTGTCCAAAATTGTGTTCATTTGGAGTCCTTGTTTGTTGGGACAAGATTGCCTACACTTCGAACTTTGGAAGTTACTGCTAGTGCGAGTCTAAAGTCTTTGCCACTTGATACTCACCATTTCCCTCAGTTAGAAACTTTGGGAATCAGCGGTGTTGTCAATGAAGATTGGCTTTATAGATCGGAGGATACTAATGCTGTCTTGAGGTTAAAAACCATTGTTCTTTATAAAATGGTAACGTTGCCTCATTCTCTCCAACGGTATGCAAGCACGTTACAAACTTTGGTGATTTCACGTTGCTACGAGCTGGAGGTACTTCCTGAATGGCTGTCGAATCTGAGTGCTTTGAAATTTCTTTATATCTGGGGTTGTCCAAAATTGATGTCTCTTCCCAGAGATATCCACCGTTTAACAAGTCTCCATCTTTTACAAATCATAAATTGCACTAAGTTGTATAGAAAATACGAGCCACAAGTTGGAGAGTGCTGGCCCATGATATCTCACATCAAGCATACTGACATTAGGAAGACATGGAATAGCTAA 1524 0.3891 MAESFIFSIAESLTAKLASRAYEEASRVVGVYDDLQDLKSSLSYVKAVLLDAEQKQERSHELREWLKQIKLIFYDAENVLDQVDCQTLRKQVVRAYGTPKDKVGRFFSSSNPLVFRWKIAQQIKDITQRLDRVAANRDKFGLQTIAVDRRVVHRREMTYSHVIESDVIGRDHDKEKIIKLLMEPSLDNNDGSKHISVIPIVGIGVYVSKDVCQLVSSNTQDIPENVLHLSFVENGLPYNSIKTSLQGVRSILFPVDNQGASEAFLNAWVSNCRYLRYLDLSNSTCETLPESIEKLRKLISLQRLEITTKQSILPESDIAKLNCLEYLCVQNCVHLESLFVGTRLPTLRTLEVTASASLKSLPLDTHHFPQLETLGISGVVNEDWLYRSEDTNAVLRLKTIVLYKMVTLPHSLQRYASTLQTLVISRCYELEVLPEWLSNLSALKFLYIWGCPKLMSLPRDIHRLTSLHLLQIINCTKLYRKYEPQVGECWPMISHIKHTDIRKTWNS 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00397 507 Gene3D - 10 124 - -
Aip06g00397 507 CDD RX-CC_like 2 134 IPR038005 -
Aip06g00397 507 PANTHER DISEASE RESISTANCE PROTEIN RP 7 204 IPR044974 GO:0006952
Aip06g00397 507 PANTHER DISEASE RESISTANCE PROTEIN RP 404 478 IPR044974 GO:0006952
Aip06g00397 507 Pfam Rx N-terminal domain 11 100 IPR041118 -
Aip06g00397 507 SUPERFAMILY RNI-like 268 478 - -
Aip06g00397 507 Gene3D Ribonuclease Inhibitor 207 388 IPR032675 -
Aip06g00397 507 Gene3D Ribonuclease Inhibitor 394 488 IPR032675 -
Aip06g00397 507 PANTHER - 7 204 - -
Aip06g00397 507 PANTHER - 404 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00397 Aip-Chr6 4693961 4696549 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00397 - - aip:110262460 422.165