Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00392 ATGGCTGAATCATTCATCTTCAGCATCGCTGAATCACTCGCTGCCAAGCTTGCTTCTCGTGCATACCAAGAAGCGTCTCGGCTGGTTGGTGTCTACGATGACCTCCAAGAATTGAAAAGCAGTCTCTCATATGTGAAAGCTGTGCTGTTGGATGCTGAGCAGAAGCAGGAGCAGAACCACGAACTGCGGGAGTGGCTGAAGCAGATCAAACTCATCTTCTATGATGCTGAGAACTTTCTTGATGAAGTTGACTGTGAAACACTGAGCAAGCAAGTCGTCAGAGACTACGGCACTCCCAAGGACAAGGTAGGTCGCTTCTTCTCGAGTTCTAATCCACTTGTCTTTCGCTATAAGCTTGGTCATCAGATCAAAGAGATTAAGAAGAGATTAGACAGAGTTGCGGCCGATAGGAATAAGTTTGGGCTTCAAGTAATTGATGTTGATAGGCGAGACGTTGCTTCACTTTGGGGGGCAGCAGGTTTGCTTTCATTGCAAAGCCAAGATAAATCGATGGTAGACATTGCACACCAATATTTGAGAGACTTAATGTATATGTTGCAAAAGATGTGTGCCAATTGCTTACAAGGTGCAAGAAGCATTCTGTTTCCAGTTAACGAAGTGGGAGCCAGTGAAGCTTTCTTGAATGCATGGGTGTCAAACTGCAAATACCTGCGATATTTGGATTTAAGTGATTCTACATGTGAGACTTTGCCTCAGTCAATTAGTAAGTTGAAACATTTAAGATCTATTTCTCTTTGTAATAATACAAGAATAAAGAGGCTCCCTAGTTCTATTTGCAAGCTCCAAAATTTGCAAGTTTTGCGTCTTGATGGGTGTTCAAATCTGGAAACTTTACCGAAAAAGTTAAGAAAGTTGATCAGCCTGCAAAGATTGGAGATAACCACAAAGCAATCTATCTTGCCAGAGAGTGACATTGCAAAGTTGAATCGTCTTGAATATTTATGCGTCCAAGATTGTGATAATTTGGAGTCCTTGTTTGTTGAGACAAGATTGCCTACACTTCGAACTTTGCAAGTTAGTGGCTGTGCGAATCTAAAGTCTTTGCCACTTGATACTCACCATTTTCCTCAGTTAGAAACTTTGGTAATCCCCGGTATTGCCAATGAAGATTGGCTTGATAGATCGGAGGATACTAATGCTGTCTTGAGGTTAAAATCTATTTATTTTTATGGAATGGTAACATTGCCTCATTCTCTCCAACAATATGCAAGCACGTTACAAACTTTGGTGATTGCATGCTTCTACGAGCTGGAGGTACTACCCGAATGGCTGTGGAATCTGAGTTCTTTGAAATCTCTTTATATCTCTGAATGTCCGAAATTGAAGTCTCTTCCCAGTGATATCCACCGACTAACTAGTCTCCAAGTTTTGGGAATCATAAAGTGCCGTGAGTTATATAGAAAATACGAGCCACAAGTTGGAGAGTGCTGGCCCATGATATCTCACATCAAGCATACTTACATTAGGGACACATGGGAGTAG 1503 0.4165 MAESFIFSIAESLAAKLASRAYQEASRLVGVYDDLQELKSSLSYVKAVLLDAEQKQEQNHELREWLKQIKLIFYDAENFLDEVDCETLSKQVVRDYGTPKDKVGRFFSSSNPLVFRYKLGHQIKEIKKRLDRVAADRNKFGLQVIDVDRRDVASLWGAAGLLSLQSQDKSMVDIAHQYLRDLMYMLQKMCANCLQGARSILFPVNEVGASEAFLNAWVSNCKYLRYLDLSDSTCETLPQSISKLKHLRSISLCNNTRIKRLPSSICKLQNLQVLRLDGCSNLETLPKKLRKLISLQRLEITTKQSILPESDIAKLNRLEYLCVQDCDNLESLFVETRLPTLRTLQVSGCANLKSLPLDTHHFPQLETLVIPGIANEDWLDRSEDTNAVLRLKSIYFYGMVTLPHSLQQYASTLQTLVIACFYELEVLPEWLWNLSSLKSLYISECPKLKSLPSDIHRLTSLQVLGIIKCRELYRKYEPQVGECWPMISHIKHTYIRDTWE 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00392 500 Pfam Rx N-terminal domain 11 98 IPR041118 -
Aip06g00392 500 CDD RX-CC_like 2 134 IPR038005 -
Aip06g00392 500 Gene3D - 10 124 - -
Aip06g00392 500 SUPERFAMILY L domain-like 217 470 - -
Aip06g00392 500 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 310 471 - -
Aip06g00392 500 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 216 355 - -
Aip06g00392 500 Gene3D Ribonuclease Inhibitor 388 481 IPR032675 -
Aip06g00392 500 Gene3D Ribonuclease Inhibitor 210 382 IPR032675 -
Aip06g00392 500 PANTHER - 310 471 - -
Aip06g00392 500 PANTHER - 216 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00392 Aip-Chr6 4588733 4591318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00392 224 402 Miscellaneous Gene Families AT4G39270 27.962 3.67e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00392 - - aip:110262460 510.76