Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00379 ATGTTGAATGAGCAATTTGCTTCCACAAGCCATGCAGCAAGAACAACAACACAACATGGACATGGTGGTGGTGATGATGATCAAGAAGAAGAAGAACACACCATAAGAGAAATTCATGCCTTAACACCACCTAGACCCCCAACAACAACAAACCATGGGAATAGGAGAAGAGAAGCTTGGGAAACTCATCACAGCCACCGTTCATCTTCTTTGTCCATGGCAAGCACAGATGGTGGTTCAAGTGAGAACTTCACAAGCATGAGTAGGGAGTTCAGTGCTCTTGTTCTTGCAGGTTCAACTATTGATCATAACAACATCAACACTACTAGCAGCTCCATGATCATGAACACTGGCCATGACAACACTGAAATTATTGGAGGAGGAAACAACAATACCAGCAGCAACAACAACAACAATAACTTGTTGGGGAGGATTAGAGAAGAGGACATGATGGAAGAGACTAACCCTTTGGCTATTGTTCCAGATAACCATCCATTGGATCCTCTTCCATCACCAAGAGGAATGACTAGTGGTGGTGCAGGTTCTAGTAGTGGTCATCATCAACATCAACATCATCATCATCAAGTAGTTGAAGAGGTTTCAGTGCAAAGGGTGAAGAAGGAGGAGGTTGATGCAAAGATATCAGCATGGCAGAACAACAAGATAGCAAAGATTAACAACAGATTCAAGAGAGAAGATGCTGTCATCAAAGGCTGGGAGAGTGAGCAGGTTCAGAAGGCTACTTCTTGGATGAAGAAAGTTGAGAGGAAGCTGGAAGAGAAAAGAGCAAAAGCAATGGAGAAAATGCAAAATGAGGTAGCAAAGGCTCATAGGAAAGCAGAGGAGAGAAGGGCATCAGCAGAGGCTAAAAGAGGAACCAAAGTTGCAAGGGTTCTTGAGATTGCTTCCCTCATGAGAGCTGTTGGAAGACCCCCTTCCAAAAAATCCTTCTTCAAAAGTTAA 963 0.4341 MLNEQFASTSHAARTTTQHGHGGGDDDQEEEEHTIREIHALTPPRPPTTTNHGNRRREAWETHHSHRSSSLSMASTDGGSSENFTSMSREFSALVLAGSTIDHNNINTTSSSMIMNTGHDNTEIIGGGNNNTSSNNNNNNLLGRIREEDMMEETNPLAIVPDNHPLDPLPSPRGMTSGGAGSSSGHHQHQHHHHQVVEEVSVQRVKKEEVDAKISAWQNNKIAKINNRFKREDAVIKGWESEQVQKATSWMKKVERKLEEKRAKAMEKMQNEVAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFFKS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00379 320 Coils Coil 251 290 - -
Aip06g00379 320 MobiDBLite consensus disorder prediction 1 84 - -
Aip06g00379 320 Pfam Remorin, C-terminal region 209 314 IPR005516 -
Aip06g00379 320 PANTHER OS02G0116800 PROTEIN 25 317 - -
Aip06g00379 320 MobiDBLite consensus disorder prediction 51 65 - -
Aip06g00379 320 MobiDBLite consensus disorder prediction 265 292 - -
Aip06g00379 320 PANTHER CARBOXY-TERMINAL REGION REMORIN 25 317 - -
Aip06g00379 320 MobiDBLite consensus disorder prediction 66 84 - -
Aip06g00379 320 MobiDBLite consensus disorder prediction 1 17 - -
Aip06g00379 320 MobiDBLite consensus disorder prediction 20 39 - -
Aip06g00379 320 MobiDBLite consensus disorder prediction 160 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00379 Aip-Chr6 4472245 4475314 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00379 - - adu:107492944 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00379 06 4472245 4475314 Aip06g00379 06 4472245 4475314 ECH
Aip06g00379 06 4472245 4475314 Aip02g01773 02 77171867 77174869 PCT