Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00360 ATGGGTATTGCAGCTGCTGCTGTGGTTGTGCCATTTGGCCTCCTCTTCTTCACTTCAGGCCTCGCTGTTAATCTCATTCAGGCAGTATCTTATGTTCTTGTACGGCCTCTGTCAAAGAATCTGCACAGGCGGATCAACCGTGTAGTTGCAGAATTGTTGTGGCTGGAACTTGTATGGCTTATTGATTGGTGGGCTGGTGTTAAGGTTGAAGTATTCACAGATCATGAAACGTTCCAATTGATGGGCAAGTATTTTCATGCCCTTGTCATATGCAATCACAGAAGTGATATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGCGCTCAGGTTGCCTTGGCAGTACTTTAGCTGTGATGAAGAAATCTTCAAAGTTTCTGCCGGTCATTGGTTGGTCAATGTGGTTTTCTGAGTATCTTTTCCTAGAGAGAAGCTGGGCCAAGGATGAGAGCACATTAAAGTCAGGCATCCAGCGACTGAGCGATTTTCCTCTTCCGTTTTGGTTGGCTCTCTTTGTAGAAGGAACACGCTTCACACAAGCTAAACTATTAGCTGCTCAAGAATATGCAGCCTCTGCTGGATTGCCTATTCCTAGAAATGTTTTGATTCCTAGAACTAAGGGATTTGTTTCAGCAGTAAGTCACATGCGCTCATTTGTTCCTGCCATTTATGACGTAACAGTGGCTATCCCCAAGTGTTCACCCACCCCTACAATGCTTAGACTCTTAAAAGGGCAACCCTCAGTGGTGCAAGTTCACATCAAGCGCCATTTGATGAATGAATTGCCAGAAACAGATGAAGCTGTTGCTCAATGGTGTCGAGATGTGTTTGTTGCCAAGGATGCATTATTAGACAAACATATAGCTGAAGATACTTTTAGTGATAAAGAGCTGCAGGATACTGGTCGGCCAAAAAAATCTCTTCTGGTAACCATATCTTGGTCTGGTCTGATTGTTACGGGAGCCGTCAAGTTTCTCCGATGGACTTCGCTACTATCATCCTGGAAGGGTATTGCAATTTCAACTGCTAGTTTGGCAGTCGTTACTGGCCTCATGCAAATCTTGATTATGTTCTCACAGTCGGAGCGTTCAACGCCGGCCAAGGTCCTCCCTGCAAAGCCAAAGAGCACAGGGGAACAAGTGGAAGATAAGAATGTCAAACAACAGTAG 1167 0.449 MGIAAAAVVVPFGLLFFTSGLAVNLIQAVSYVLVRPLSKNLHRRINRVVAELLWLELVWLIDWWAGVKVEVFTDHETFQLMGKYFHALVICNHRSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLKSGIQRLSDFPLPFWLALFVEGTRFTQAKLLAAQEYAASAGLPIPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKCSPTPTMLRLLKGQPSVVQVHIKRHLMNELPETDEAVAQWCRDVFVAKDALLDKHIAEDTFSDKELQDTGRPKKSLLVTISWSGLIVTGAVKFLRWTSLLSSWKGIAISTASLAVVTGLMQILIMFSQSERSTPAKVLPAKPKSTGEQVEDKNVKQQ 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00360 388 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 37 240 - -
Aip06g00360 388 Pfam Acyltransferase 87 229 IPR002123 GO:0016746
Aip06g00360 388 MobiDBLite consensus disorder prediction 363 388 - -
Aip06g00360 388 CDD LPLAT_LCLAT1-like 62 254 - -
Aip06g00360 388 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 7 377 - -
Aip06g00360 388 SMART plsc_2 87 209 IPR002123 GO:0016746
Aip06g00360 388 Pfam Acyltransferase C-terminus 240 313 IPR032098 -
Aip06g00360 388 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 7 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00360 Aip-Chr6 4224710 4234017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00360 3 376 Miscellaneous Gene Families AT3G57650 77.540 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00360 K13523 - gmx:100812696 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00360 06 4224710 4234017 Aip06g00360 06 4224710 4234017 ECH
Aip06g00360 06 4224710 4234017 Aip02g01782 02 77670032 77677174 PCT