LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip06g00353	ATGAAAGTTAATGAAATGGTAGCTAGTGAAAGCAAAAATAAAGTAGTTGATGGTCATTCCAGCGATATGGAGAAAGAGCGAAATGATGGGAATGAAGAAGTGTCAGATACGGAGACAGTAAAGGATTCAGTATCATCACAAGGTGATTCTTTCACAAATGAGGATGATGAAAATTCTGAAAAAGCTTCTAAAGATCCCAAAAGTAAGGTTAGAGTAGCTCCTATAGAAGGCAATCGTCGATTAAGGGAGAGATCTGATAGAAAAACTAATAAACAAGCAGCAAAGGTATCCAATGGTAATCAAAAGAAACCTATCAACTCAAATAAAGGGCCTTCTAGAGTTACCAACAAAAACACTCCTTCAACCAATTTCAAGGCTGTGAAAGCTCCTGCAAAACTTTCGTCAGAATTGTCTGATGGAAATGGAATTGATGAAAAATCTGTTCATGTGGTCAAGGAAATTGATATTGTGGATGGATCCTCAAATGGTGCTCAGAGTGTAGGAAGTGAAGATGAAAGTAATGAAACAGTTGATGTTGAAGTAAAAGTTGAGCATGAAGATAATGCAGCCATGCAATCAAAAATTGAGGAAATGGAAGTGCGAATTGAAAAGCTAGAAGAGGAACTAAGAGAAGTTGCTGCACTTGAGGTGTCACTTTATTCTGTGGTACCAGAGCATGGGAGCTCAGCGCACAAAGTGCACACACCTGCTCGTCGCCTTTCTAGGTTATATATACATGCTTGTAAGCATTGGACCCAAGACCGGCGGGCGACAATTGCCAAGAATACTGTTTCTGGCCTTATTTTGGTGGCCAAATCTTGTGGTAATGATGTTTCAAGGTTAACTTACTGGTTGTCAAATACTGTTGTGCTGAGAGAGATACTTTCACAAGCCTTTGGGAGCTCATTTCAAACTAGCCACCTTGTGAGGTTAGCCGAGTCAAATGGGAAGTCTACAGCACTGAAATGGAAAGTTGGCTCCATTGGCAAACAAGGAAAGGGCTTTGTGAAGTTTGTTGAAGATTGGCAAGAGACAGGAACATTCGGATCTGCACTAGAAAGAGTAGAATCATGGATATTCTCTCGGCTAGTGGAATCAGTATGGTGGCAGGCCTTGACTCCTTATATGCAGTCTCCAGTTGGAGACTCGTCAAATAAGTCCATTGGGAGGCTTTGGGGACCTTCCCTAGGTGATCAGAAGCAAGGGAGCTTTTCCATGAATCTATGGAGAAATGCTTTTCAAGATGCTTTTCAGCGGCTCTGTCCTGTTCGAGCAGGAGGTCATGAGTGTGGTTGTTTGCCTGTTTTGGCTAGAATGGTCATGGAACAGTGCATAGCTAGACTAGATGTAGCAATGTTCAATGCAATTCTTCGGGAGTCAGCACTTGAGATCCCAACTGATCCTGTATCAGATCCTATTGTGGATTCGAAGGTTTTGCCAATTCCCGCAGGAGATTTGAGCTTTGGTTCTGGTGCACAGATGAAAAATTCTGTTGGCAATTGGTCTCGATGGCTTACTGATATGTTCGGCATGGATGTTGAAGATTGTCTGCAAGATCAGGAGAGTGGTGAGAACGATGAGAGCAGGGACAACGATAGCAAACCTAAATCTTTTCTCCTCCTTAACGATTTGAGTGACCTTCTAATGCTCCCAAAGGATATGCTTATGGATAAACAAGTCAGACGAGAGGTATGTCCATCCATCACCCTTTCGTTGATTATACGGGTGCTCTGCAACTTCACTCCTGATGAGTTCTGTCCAGATCCTGTTCCAGGAATTGTGCTGGAATCTCTGCATGAGGAGTTTATGGCGGAGAGGAAGTTGTCACCAGAATCTGCTAGGAGTTTCCCGTATGCGGCTGCTCCTGTTTTCTACGTTCCTCCCTCCTCGGCTAACGTGGCGGAGAAAGTTGCAGAGGCCGGAGGAAAGTCTCACCTAGAGAGGAATGCCTCAGCCGTTCAGAAGAGAGGATATACCAGTGATGAAGAACTGGAGGAACTTGATTCCCCTCTTACATCCATCATTGATAAGATGCCTTCATCTCCTACAGTTACTGCTAATGGAGAAGGCCATCACAACGAGCAAGGAAGTATCACAAATGTTAGATATCAACTCCTTCGAGAAGTCTGGTCCACGTGA	2139	0.4348	MKVNEMVASESKNKVVDGHSSDMEKERNDGNEEVSDTETVKDSVSSQGDSFTNEDDENSEKASKDPKSKVRVAPIEGNRRLRERSDRKTNKQAAKVSNGNQKKPINSNKGPSRVTNKNTPSTNFKAVKAPAKLSSELSDGNGIDEKSVHVVKEIDIVDGSSNGAQSVGSEDESNETVDVEVKVEHEDNAAMQSKIEEMEVRIEKLEEELREVAALEVSLYSVVPEHGSSAHKVHTPARRLSRLYIHACKHWTQDRRATIAKNTVSGLILVAKSCGNDVSRLTYWLSNTVVLREILSQAFGSSFQTSHLVRLAESNGKSTALKWKVGSIGKQGKGFVKFVEDWQETGTFGSALERVESWIFSRLVESVWWQALTPYMQSPVGDSSNKSIGRLWGPSLGDQKQGSFSMNLWRNAFQDAFQRLCPVRAGGHECGCLPVLARMVMEQCIARLDVAMFNAILRESALEIPTDPVSDPIVDSKVLPIPAGDLSFGSGAQMKNSVGNWSRWLTDMFGMDVEDCLQDQESGENDESRDNDSKPKSFLLLNDLSDLLMLPKDMLMDKQVRREVCPSITLSLIIRVLCNFTPDEFCPDPVPGIVLESLHEEFMAERKLSPESARSFPYAAAPVFYVPPSSANVAEKVAEAGGKSHLERNASAVQKRGYTSDEELEELDSPLTSIIDKMPSSPTVTANGEGHHNEQGSITNVRYQLLREVWST	712

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip06g00353	712	MobiDBLite	consensus disorder prediction	54	91	-	-
	Aip06g00353	712	MobiDBLite	consensus disorder prediction	15	39	-	-
	Aip06g00353	712	MobiDBLite	consensus disorder prediction	92	123	-	-
	Aip06g00353	712	MobiDBLite	consensus disorder prediction	674	698	-	-
	Aip06g00353	712	Coils	Coil	188	215	-	-
	Aip06g00353	712	PANTHER	NUCLEAR PORE COMPLEX PROTEIN NUP205	14	711	IPR021827	GO:0005643
	Aip06g00353	712	MobiDBLite	consensus disorder prediction	1	123	-	-
	Aip06g00353	712	MobiDBLite	consensus disorder prediction	673	698	-	-
	Aip06g00353	712	PANTHER	NUCLEOLAR PROTEIN GAR2-LIKE PROTEIN	14	711	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip06g00353	Aip-Chr6	4128488	4133902	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip06g00353	-		-	gmx:100777738	1054.66

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip06g00353	06	4128488	4133902	Aip06g00353	06	4128488	4133902	ECH