Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00335 ATGGAAACCATGCTCAAGTTATGCTTCCTTTCACTACTATTACTCTCTCCATTTGCATTCTCCGAACTATGCAACCCAAGTGACAAGAAAGCGTTGCTCCAAATCAAGAAGGACTTCAACAACCCTAATGCCGCGGTGTTTCCCTCCTGGAACCTAGCCATTGATTGTTGCGACTGGAATGGCATCGAGTGTGACTCCAACACCAACCGTGTTATCTCCCTCACTATCATAACCGATGATAGTTTGTCGGGACAAATACCACCCGCCGTGGGTGACCTTCCTTACCTTCAAACTCTCGAATTCCACAAGCTACCCAAACTCACCGGTCCAATTCCGCCAGCAATCACAAAGCTCACCAATCTAAAGGAGCTCTATCTTAGCTGGAACAATCTCTCCGGACCTGTACCAGATTTCTTTCCCCAACTCACGAGCCTCGAGTTTCTAGACCTTTCTTTCAATAACCTCTCTGGCCGCATACCTAGCTCACTCTCCCAAATTCCTAACCTACAGTCCCTTCGTTTGGACCGGAACAGGCTCACCGGCCCAATCCCGGACTCGTTCGGGTACTTTAGGCAGAAGGGAATTGGACTAGACCTCTCCCACAACCAGCTTTCAGGTCCCATTCCAGCTTCCCTAACCCGGTTGGAGCCCGAGAGGATATTTCTCTCAAGGAACAAGCTTATAGGAGATGCATACATGCTTTTTGGAGCCAACAAATCGACCCAGCAAATTGACATTTCAAGGAACATGTTCTCGTTTGATCTGTCCAAAGTGGAGTTCCCAACAAGCAACTTGATAATGGTGGACCTGAACCACAACCAGATCTATGGCAGCATTCCGCAGCAGATAATACAAGTGGACTTTTTGCAGATTTTCAATGTGAGCTATAATCGGTTGTGTGGTGAGATACCACAAGGTGGAAGATTGCAGAGGTTTGATAATACTACGTATTTTCACAACAAGTGTTTGTGTGGATCACCACTTCCAAGCTGCAAATGA 999 0.4695 METMLKLCFLSLLLLSPFAFSELCNPSDKKALLQIKKDFNNPNAAVFPSWNLAIDCCDWNGIECDSNTNRVISLTIITDDSLSGQIPPAVGDLPYLQTLEFHKLPKLTGPIPPAITKLTNLKELYLSWNNLSGPVPDFFPQLTSLEFLDLSFNNLSGRIPSSLSQIPNLQSLRLDRNRLTGPIPDSFGYFRQKGIGLDLSHNQLSGPIPASLTRLEPERIFLSRNKLIGDAYMLFGANKSTQQIDISRNMFSFDLSKVEFPTSNLIMVDLNHNQIYGSIPQQIIQVDFLQIFNVSYNRLCGEIPQGGRLQRFDNTTYFHNKCLCGSPLPSCK 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00335 332 Gene3D Ribonuclease Inhibitor 22 332 IPR032675 -
Aip06g00335 332 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Aip06g00335 332 SUPERFAMILY L domain-like 23 331 - -
Aip06g00335 332 PANTHER POLYGALACTURONASE INHIBITOR 1 7 331 - -
Aip06g00335 332 Pfam Leucine rich repeat 119 179 IPR001611 GO:0005515
Aip06g00335 332 SMART LRR_typ_2 118 141 IPR003591 -
Aip06g00335 332 SMART LRR_typ_2 142 165 IPR003591 -
Aip06g00335 332 SMART LRR_typ_2 166 189 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00335 Aip-Chr6 3895372 3896370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00335 1 330 Receptor kinase-like Gene Family AT2G15080 32.670 2.70e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00335 - - aprc:113862147 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00335 06 3895372 3896370 Aip06g00335 06 3895372 3896370 ECH