Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00327 ATGACGGAACCGATCGAGCCAAGCACATCGTCGTCAATGAGCACGGTGTTTCTTCACCCTCGGCGCGAGCCCTTCGAGCACGGCCTCTTACCGATCCCGAAGCTCATCTTCTCCGACCCCGCGCAAACCCTAATTTCGCTGAAGCAGAAGCTTCTTGAGCTCTCCTCCGGCGGCAAAGTCGATCCGGCGGCGATCTCCGAGTCTCTTCAGATCTCGCTCGACCACGCCAGGCTCGTCCTTGACACGCTTTCCTCCGTCCTCCCATCTTCGGAGCCCGAGCTACCCACCGCCGAAGTCTCCGCCGTCGACTTGCATGATCTGTTGCTGTTCCTGTACATTCAATCCTACAAGAGGCTCCTGCCGCGCACGCACAAGGACTCCGTCGCCGTTGCTGACGTCTGGCCTTCCACCTCCGCCTTCGATGGCTACTTGTCCGCTCTCTCGCCGCTTCAGCTTGTCCGGAGCAACAGCCGGCGGTTTATGCCGTCACAGGCTGACGAGGAGGCGCATCAATTGTCATACCTGCAGAAGCACTTGGCTAACATTCTGTCTCTCCTAGCTGAGCCCGTGGAGGGGGAAGGGGAAGAATCTCTGGTTTTATCCATGGATAGATTTGAACACCTTGGGTTTCTAGTTCAGTTTGGTGATAAGGGATCTGAAGGAAATTCTTTGAGTCAACATTCTCCTTTCTTTGCAAACTCAGATCCTGACATGCCAGCTGTTCCTGCTCCTGCTGCACAAGTTCATGATTGGCTTCTGCAGAATATAACATCTGCATTGGAACACATTTCTGAACGGACTTCTTCCAAGGAAAATGGCCCAGCTAGTGCCTCTGACCAGGATGTTGCTATGACTGATGCATGCAATGCCCCAGTAAAGGTCTCAACAAGTACTAGAGCTCCAAGTTTCATTGAAGGGGTTTCTAAATCCTCATATGTGAAGCATGCATCTGACATTAAAGGTTCCTCTGTTAAGGTTGTAAATTGCCATGAGTCAGCCATCTACATTTTAGCACCTTTGCGATATGCCACTGTGTATGGATGCTCAGATTCTACAATAGTTCTGGGAGCAGTTGGGAAGGCTGTAAGGGTAGAGCATTGTGAACGAGCTCATGTGATTGTTGCAGCAAAACGTATTTGTATTGCTAATTGCCGTGAATGTGTCTTCTTTTTGGGGGTGAATCAGCAACCTCTTATTCTTGGTGATAACCATAAGTTGCAGGTGGCTCCCTATAACACATTTTACCCACAATTGGAGGAGCATATGAACGAAGTTGGAATTCTGCCCACAGTGAACCAATGGGATAATCCTATAGCACTGGGCATGGTGGATCCTCATGATTCACTATCTCACCCTGCAGGTGTTGCTGATGTTCAAGCGGAGTCCGCATCACGGGTGGATCCTGATCAGTTCACAAATTTTGTGATTCCAAACTTGTCTGAAGAGTCAACTGGATCTACAAAAGCCAACCCATTTACATTACCAGATGCTTATATGGCATCTCAGCAAAGAAATCAAAAAAATTTAGGGGAGATAAGGGAACTATTGCGTGAAGCACCTTTAGAAGATAATCGTAAACGGGAATTGTCATCAGCTCTCCATGTGTACTTCAAGGACTGGTTATATGCTTCTGGCAATATTCGTCAGCTTTACTGTCTTCAAGGCGATTAA 1671 0.4871 MTEPIEPSTSSSMSTVFLHPRREPFEHGLLPIPKLIFSDPAQTLISLKQKLLELSSGGKVDPAAISESLQISLDHARLVLDTLSSVLPSSEPELPTAEVSAVDLHDLLLFLYIQSYKRLLPRTHKDSVAVADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHLANILSLLAEPVEGEGEESLVLSMDRFEHLGFLVQFGDKGSEGNSLSQHSPFFANSDPDMPAVPAPAAQVHDWLLQNITSALEHISERTSSKENGPASASDQDVAMTDACNAPVKVSTSTRAPSFIEGVSKSSYVKHASDIKGSSVKVVNCHESAIYILAPLRYATVYGCSDSTIVLGAVGKAVRVEHCERAHVIVAAKRICIANCRECVFFLGVNQQPLILGDNHKLQVAPYNTFYPQLEEHMNEVGILPTVNQWDNPIALGMVDPHDSLSHPAGVADVQAESASRVDPDQFTNFVIPNLSEESTGSTKANPFTLPDAYMASQQRNQKNLGEIRELLREAPLEDNRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00327 556 Pfam Tubulin binding cofactor C 321 436 IPR012945 -
Aip06g00327 556 Gene3D - 302 459 IPR016098 -
Aip06g00327 556 ProSiteProfiles C-CAP/cofactor C-like domain profile. 291 427 IPR017901 -
Aip06g00327 556 PANTHER UNCHARACTERIZED 3 556 IPR039589 -
Aip06g00327 556 PANTHER CYCLASE-ASSOCIATED PROTEIN CAP/SEPTUM FORMATION INHIBITOR MINC-RELATED 3 556 - -
Aip06g00327 556 SMART carp 329 366 IPR006599 -
Aip06g00327 556 SMART carp 367 401 IPR006599 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00327 K16810 - gmx:100800780 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00327 06 3785842 3791629 Aip06g00327 06 3785842 3791629 ECH