Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00311 ATGGAGGAGTATCACAATTTTACGCTTAAATACTCCTTCTTTGCGCCCCATACCCCTCTGCCCCCTTCTCTCATTTCCTCACACCTTCTTCATTTGCCGCCACACACATTCCTCCTCCTCCGTCACACCTTCTCCTCCATCCAGGTTGCGGGAAGATGGGAGCTGGCGGCCGAACCTCTTCTCAGCCAAGTCAAGAAGGCCATCCCACCTCACTGTTTTCAGCGTTCTGTTATCCGCTCATTCTCCTATGTTGTCTATGATCTCACCATAGCCTTTTGCCTCTACTATGCCGCCACCAATTACTTCCACAAACTCTCTTCCCCTTTATTTTACTTGGCCTGGCTTCTCTACGGGGCTGTCCAAGGTTGCATCCTTACCGGTGTTTGGGTCATCGCACACGAATGTGGCCACCATGCATTCAGTGATTATCAATGGCTTGATGATACGGTTGGCCTTGTTCTCCACTCTGGCCTCTTGGTCCCTTACTTTTCATGGAAATACAGCCACCGTCGCCACCACTCCAACACCGGTTCCCTTGACAGGGATGAAGTCTTTGTGCCAAAGAAAAGGTCTAGTATTGCATGGTGGTCTAAGTACCTTAATAACCCACTAGGAAGAGTGCTCACACTCACTATTACCCTCACCCTTGGTTGGCCACTTTACTTGGCTTTTAATGTCTCGGGAAGGCCTTATGATAGGTTTGCTTGCCACTATGACCCATATGGTCCAATCTACTCCGATCGCGAACGACTTCAAATATACATATCAGATGCTGGAGTGCTTGCAGTTTCCTATGGTCTTATTCGTCTTGTCCTGGCAAAAGGCCTTGCCTGGGTTGTGGCTGTTTATGGTGTTCCATTGCTAGTGGTCAATGGATTCTTGGTGTTGATCACATATTTGCAGCACACTCACCCTGCATTGCCACATTACGATTCATCCGAGTGGGACTGGTTGAGGGGAGCATTGGCGACCGTGGACAGAGACTATGGAATCCTGAACAAGATCTTCTTCCTATCTTTTCCCTGCTTTGTGCTCCAATTTACCACTGCGGGTATACTAATTGTGACTGAGACTTTCGATTGGCTCTCCTCTGCTGCCTGCGCTTTGAATGAAGCTCCGACGTCGAGGGTGCACAAACATGGAAGCTTCCACTTCCTCTCCTCTGAATTTGCAATTTTGATGATGACGTGTTTTTCGATTTGCAACCTATTTGCCTTGAAATTCGTTTCCTGCACCGAGCCCGCTCCCTTTTCTCTTTTGTTGTCAACGTTGAGCTTCCATGTTGATAATACGCCGCATCTCCAATGGTGGTTGCATACTccagttctgacgaagCTAATGGGTCGCAACTGGTTGAGGTTCTCTGCGTTCTTGGTCTTAGGAATTAAGACCACTGTTGTCTCGCTCACCTCTTCAGGTCACAAGCCCAATAATTCATACACACAACATAGCCGCCGCCCCATTCTTCCCACCGGTCAATTGGGCATTGGCCAACTTGGATAA 1503 0.4797 MEEYHNFTLKYSFFAPHTPLPPSLISSHLLHLPPHTFLLLRHTFSSIQVAGRWELAAEPLLSQVKKAIPPHCFQRSVIRSFSYVVYDLTIAFCLYYAATNYFHKLSSPLFYLAWLLYGAVQGCILTGVWVIAHECGHHAFSDYQWLDDTVGLVLHSGLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKKRSSIAWWSKYLNNPLGRVLTLTITLTLGWPLYLAFNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVSYGLIRLVLAKGLAWVVAVYGVPLLVVNGFLVLITYLQHTHPALPHYDSSEWDWLRGALATVDRDYGILNKIFFLSFPCFVLQFTTAGILIVTETFDWLSSAACALNEAPTSRVHKHGSFHFLSSEFAILMMTCFSICNLFALKFVSCTEPAPFSLLLSTLSFHVDNTPHLQWWLHTPVLTKLMGRNWLRFSAFLVLGIKTTVVSLTSSGHKPNNSYTQHSRRPILPTGQLGIGQLG 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00311 500 Pfam Fatty acid desaturase 111 338 IPR005804 GO:0006629
Aip06g00311 500 MobiDBLite consensus disorder prediction 471 488 - -
Aip06g00311 500 CDD Delta12-FADS-like 75 336 - -
Aip06g00311 500 PANTHER OLEATE HYDROXYLASE FAH12 61 337 - -
Aip06g00311 500 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 61 337 - -
Aip06g00311 500 MobiDBLite consensus disorder prediction 471 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00311 Aip-Chr6 3615843 3626770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00311 61 336 Lipid Metabolism Gene Families AT3G12120 75.725 4.80e-159 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00311 K10256 - gmx:547815 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00311 06 3615843 3626770 Aip06g00311 06 3615843 3626770 ECH