Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00306 ATGCTGAAAGCTATTCAGATACGTGGGTGTGTTACCCTCCGTTGTTGGAGCCTCAAACAATCCCTTTCCTTCATTTCTATTTCATCTTCTTTCAATTCCAAACCCTTTTCCTCATTCTCCCCAATCCCATACCCTTCCATCGATTCTTCCACGCCCCGACCTCGCAGGCTTCGATTCACTCCCTTTCACGCTTCATCATCACCACCACCCCCACCACTACTTCATTCTGCTGGTGTTCGAAACATCAAGTTCTGTCAGTGGTGTGGTGGTCCAACAAAGCATGATATACCTGATGGAGAAGAAAAATTGAGAGCCATTTGTACACTTTGTGGGAAGATTGCTTATCAGAATCCAAAAATGGTAGTCGGTTGCCTCATCGATCATGATAACAAGGTCCTTCTTTGCAAGAGGAATATTCAACCATCTCATGGCCTTTGGACGCTTCCTGCTGGTTATTTGGAAATTGGAGAATCAGCTGTGGAAGGTGCTATAAGGGAAACGAGGGAAGAAGCAAACGCTGATGTGGAAGTTATTTCTCCGTTTGCTCAATTGGATATTCCTTTAATCGGTCAAACTTATATGATATTCTTAGCAAAACTGAAGACACCCCACTTTTCACCGGGTCCAGAATCATCAGAATGCCAACTATTTCCGGTTGATGAAATACCTATCAATTCTCTATCCTTTTCATCAATGGTGGTTACCTTAAGTTTGTATGTTGAGGATGTTAAGGCTGGAAAACCTAAATTCCATTATGGCATCATCAACAAAAGGCCCGGTACGAGTCCTTCAGATATTCATGCCTATACATTGGATCATCATATGCACTTGTGA 834 0.4281 MLKAIQIRGCVTLRCWSLKQSLSFISISSSFNSKPFSSFSPIPYPSIDSSTPRPRRLRFTPFHASSSPPPPPLLHSAGVRNIKFCQWCGGPTKHDIPDGEEKLRAICTLCGKIAYQNPKMVVGCLIDHDNKVLLCKRNIQPSHGLWTLPAGYLEIGESAVEGAIRETREEANADVEVISPFAQLDIPLIGQTYMIFLAKLKTPHFSPGPESSECQLFPVDEIPINSLSFSSMVVTLSLYVEDVKAGKPKFHYGIINKRPGTSPSDIHAYTLDHHMHL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00306 277 Pfam NUDIX domain 122 222 IPR000086 -
Aip06g00306 277 ProSiteProfiles Nudix hydrolase domain profile. 117 240 IPR000086 -
Aip06g00306 277 SUPERFAMILY Nudix 83 241 IPR015797 -
Aip06g00306 277 PANTHER BNAA03G19740D PROTEIN 1 275 - -
Aip06g00306 277 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 117 268 - -
Aip06g00306 277 Pfam Nudix N-terminal 83 116 IPR029401 -
Aip06g00306 277 ProSitePatterns Nudix box signature. 151 172 IPR020084 GO:0016787
Aip06g00306 277 PANTHER NUDIX HYDROLASE 23 1 275 - -
Aip06g00306 277 Gene3D - 80 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00306 Aip-Chr6 3589710 3592576 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00306 K18453 - gmx:100808417 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00306 06 3589710 3592576 Aip06g00306 06 3589710 3592576 ECH