Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00294 ATGGCAAAGCAGACTTTGGAAGACGACCAGAAGAAGCAGGAGGTAGAACACACGTCACCCTCCGTCGCCCCCGACGCCGCTGCCATCGCTGACTCCGTCAAGCGCCGCCTCGCCTCCCACGGAAGCTCCTCCCTCGCTCTCTCCTTCGCCGACCTCTTCGCCAAGTTCTCCTCCAAGACCGGCCCTGGCAGCGTCAACAACAAGTGGGCCGTCGTCTACCTCCTCAAGATCATTTCCGAGGATCGCAAGGGTGCGAAGTCCCAGTATTGCCCTTCTAACCTCTTGCCCAATTTGTCCCTCTCCGACGACGCCGATTTTGGTAAGGGTAAGGGTTCTTCTTCTGTTAAGCCTTTGGGGGATAATAACAAAAAGGGATGGGATAACGGGGTTCTATTGGTTTCAAAGGATCCCGAGAATAGGCGCGAGCTTGCGTTTAGAGAATTTGTCAATTTGGTTAGGGAAGAGAATGAGGTTTCTGAAGAGGTTTTGGTTAGGGATGTGTTGTATGCTTGCCAAGGGGTTGATGGGAAGTATGTTAAATTCGATGGTGGTAGTGATGGCGCTGGGTATGTGTTATCAGATTCGATTAGGGTGCCTAGAGCTACTAGAATTATGGTTCATAAGCTTTGTGAATTGGGCAGATTGTTTAGGAAGGTTACTGGGTATATTGCGCAGAGTATGGATCGGTTTCCGGCCGAAGACGTAGGTACTGTTGGGCAGGCTTTGTGTTCTGCATTGCAGGATGAGCTTACTGAGTATTATAAGTTGCTAGCTGTGCTTGAGGCGCAGTCTTCGAATCCAATTCCTTTGGTATCCGAAACTGCTAGCTCGGGAAATTATCTTTCACTGAGGAGGTTGGCTGTTTGGATTGCAGAACCAATGGTGAAGATGAGGTTGATGGCTGATTTGGTTGACAAGTGCAGGGTTCTGAAGGGCGGTGCAATGGCCAGTGCAATTCATTTGCATGCCCGACATGGCGATCCTCTGGTTCATGAGTTCATGAGGAGGTTGCTGCAGAGAGTGTGTGCACCTCTGTTTGAGATGGTGAAAAGGTGGGTTCAGGAAGGGGAGTTGGAGGATATATTTGCAGAGTTTTTTATTGTGGGGCAAGAGGTGAAAGCTGAGTCTCTTTGGCGTGAAGGTTATAGGCTCAACCACTCGATGCTTCCTTCATTCATTTCACCCTCGCTTGCACAGCGTATTTTGAGGACTGGGAAGTCCATCAATTTCCTTCGGGTGTGCTGTGATGATCGCAGTTGGGCTGATGCAGCAACCAGAGTTGCCACTGATATAGGGGTGACAGCAAGAAGAGGGGGTTTTGGGTACGGTGAAACTGATACCCTTGCTTCACTAGTTGATGAAGCTGCAAAGAGAATTGATAAGCATCTGTTGGATGTAATTTACAGACGGTACAAATTCAAAGAACACTGCCTTGCAATTAAGCGGTATTTATTGCTTGGTCAAGGTGATTTTGTGCAATATCTAATGGACATTGTTGGGCCTGATCTTTCTGAGCCAGCAAACACGATAAGCTCTTTCAAACTCTCTGGACTGTTGGAAACTGCAGTTCGGGCATCCAATGCTCAGTATGATGATCGTGACATGTTGGATAGGCTCAGGGTCAAAATGATGCCGCATGAAAGCGGTGACAGGGGCTGGGATGTATTTTCACTGGAATATGATGCAAGAGTTCCGTTGGACACTGTGTTCACGGAGTCTGTGATGGCAAAGTATTTAAGAATTTTTAACTTTTTGTGGAAGCTTAGAAGAGTTGAACATGCACTTACTGGTGCCTGGAAGACCATGAAACCAAACTGCATCAGTTATCATTCCTTTACCAGATTGCAAAGTGCAGTAAAGAAGGAGTTGGATTCAACATTGAGGCGCTGCCAGGTTCTATGGGTTGAAATTAATCACTTCATTTCAAATTTGCAATATTATATAATGTTCGAAGTCTTGGAAGTATCATGGTCAAACTTCTTAAGTGAGATGGATGTAGCCAAGGATCTTGATGATCTACTTGCAGCTCATGACACATATCTAGATTCCATTGTAGAGAAATCCCTTCTTGGTGAGCTCTCCCAATCGCTTTACAAGTCATTATTAGTGATATTTGACCTTATACTACGTTTTCGGAGCCATGCGGATCGGCTGTATGAAGGTATTCAGGAGTTGCAAGCAAGAATCACAAGATCCTCCCAATCCTCTTCTGAACAAGGATCCTGGACTGCTGATGGAAGGAAAGCCCTAACACAACGTGCTGGCGAATTTCTTCGAAATATGGGACATGATCTGGAGGAGATTGCAAAGGAGTATTCGTCATTGCAAGAGGAATTCATATCTCAGTTCCCTGTACAGAAGCATGTTGATCTAAAGTTTCTCTTTTTCCGTCTCGATTTCAATGAATTTTATAGGCGGGTGTCTCCTAGCTCATAA 2436 0.4618 MAKQTLEDDQKKQEVEHTSPSVAPDAAAIADSVKRRLASHGSSSLALSFADLFAKFSSKTGPGSVNNKWAVVYLLKIISEDRKGAKSQYCPSNLLPNLSLSDDADFGKGKGSSSVKPLGDNNKKGWDNGVLLVSKDPENRRELAFREFVNLVREENEVSEEVLVRDVLYACQGVDGKYVKFDGGSDGAGYVLSDSIRVPRATRIMVHKLCELGRLFRKVTGYIAQSMDRFPAEDVGTVGQALCSALQDELTEYYKLLAVLEAQSSNPIPLVSETASSGNYLSLRRLAVWIAEPMVKMRLMADLVDKCRVLKGGAMASAIHLHARHGDPLVHEFMRRLLQRVCAPLFEMVKRWVQEGELEDIFAEFFIVGQEVKAESLWREGYRLNHSMLPSFISPSLAQRILRTGKSINFLRVCCDDRSWADAATRVATDIGVTARRGGFGYGETDTLASLVDEAAKRIDKHLLDVIYRRYKFKEHCLAIKRYLLLGQGDFVQYLMDIVGPDLSEPANTISSFKLSGLLETAVRASNAQYDDRDMLDRLRVKMMPHESGDRGWDVFSLEYDARVPLDTVFTESVMAKYLRIFNFLWKLRRVEHALTGAWKTMKPNCISYHSFTRLQSAVKKELDSTLRRCQVLWVEINHFISNLQYYIMFEVLEVSWSNFLSEMDVAKDLDDLLAAHDTYLDSIVEKSLLGELSQSLYKSLLVIFDLILRFRSHADRLYEGIQELQARITRSSQSSSEQGSWTADGRKALTQRAGEFLRNMGHDLEEIAKEYSSLQEEFISQFPVQKHVDLKFLFFRLDFNEFYRRVSPSS 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00294 811 MobiDBLite consensus disorder prediction 1 24 - -
Aip06g00294 811 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 23 799 - -
Aip06g00294 811 Pfam Gamma tubulin complex component N-terminal 164 467 IPR041470 -
Aip06g00294 811 Pfam Gamma tubulin complex component C-terminal 475 804 IPR040457 GO:0043015
Aip06g00294 811 Coils Coil 243 263 - -
Aip06g00294 811 Coils Coil 758 778 - -
Aip06g00294 811 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 23 799 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Aip06g00294 811 MobiDBLite consensus disorder prediction 1 18 - -
Aip06g00294 811 Gene3D - 474 803 IPR042241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00294 Aip-Chr6 3464192 3470085 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00294 K16570 - gmx:100784710 1231.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00294 06 3464192 3470085 Aip06g00294 06 3464192 3470085 ECH