Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00280 ATGCTCAAACCCTTAACTCTCATCTCCACATTCACCCTCCTCTTCTTCCTCTTCTCTTCCCATGTAACCGCCAAACAACCTCGCTTTTATCGAACCATCTCTCCCACATTTCTAGGCCTACGCAAGGAGAAGCTTACTCACCTCCATTTCTACTTCCACGACACTGCCAGCGGCCCAAACCCCACCGCCATCGTAGTCGCCCAGGCCCAAATAACCAAAAACTCCTCCACTCTCTTCGGAGCCGTGGCCGTCATGGACGATCCCTTGACCGTGGGGCCTGAGCCCGGCTCCAAGATTGTGGGAAAAGCCCAGGGAATCTGGGCGGCTGCTTCGCATGACGAGATTGGGTTGGTAATGGTGGTGAACTTGGAGTTCTGTGAAGGGAAATACAATGGCAGCACGTTAAGCTTGTTTGGACGGAACGCGGTGCTTAACAGCGTGAGGGAGATGCCCATTGTTGGTGGCAGTGGGGTTTTCCGATTTGCGCATGGTTATGGTGAGGCCAAGACACACTGGTTCAATATAACGTCAGGGGATGCTGTTGTTGAATACAATGTCTACGTCTTCCACTATTGA 576 0.5226 MLKPLTLISTFTLLFFLFSSHVTAKQPRFYRTISPTFLGLRKEKLTHLHFYFHDTASGPNPTAIVVAQAQITKNSSTLFGAVAVMDDPLTVGPEPGSKIVGKAQGIWAAASHDEIGLVMVVNLEFCEGKYNGSTLSLFGRNAVLNSVREMPIVGGSGVFRFAHGYGEAKTHWFNITSGDAVVEYNVYVFHY 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00280 191 Gene3D - 38 186 IPR044859 -
Aip06g00280 191 PANTHER NUCLEOPORIN-RELATED 9 190 IPR004265 -
Aip06g00280 191 Coils Coil 191 191 - -
Aip06g00280 191 Pfam Dirigent-like protein 46 189 IPR004265 -
Aip06g00280 191 PANTHER DIRIGENT PROTEIN 9 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00280 Aip-Chr6 3235049 3235935 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00280 - - gmx:100816095 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00280 06 3235049 3235935 Aip06g00280 06 3235049 3235935 ECH