Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00279 ATGGCAATGGCCACATCCAAAACCCTCTTCTCTATCTTCTTCATTCCTCTCCTCTTCTCCACCCTTGTCACCGCCAAAGACCCTCGTTTCGATCGAAGCCTGTCTCCAAAATCACTGGGCCTCCGCAAGGAGAAGCTTAGCCACCTCCACTTTTACTTCCACGACATTCTCAGCGGCCAAAACCCCACCGCTGTTAGGGTGGCCCAAGCTGCAATGACGGCCACGTCCCCCACGTTATTCGGAGCTGTAATGATGGCCGATGACCCCTTAACCGTTGGGCCTGAGCCCAACTCCAAGGTCATAGGAAAAGCCCAGGGGATTTATGCGTCTGCGTCGCAAAATGATCTTGGGCTATTGATGGTGTTGAACTTTGCATTCATGGAAGGGAAGTACAATGGGAGCACAGTGAGCTTGTTGGGGCGGAATGCGGTGTTTTCCGGCGTGAGGGAGATGTCGATCGTGGGAGGGAGCGGGGTTTTCCGATTTGCACGTGGATACGCTCAGGCCAAGACTTTCTGGCTTAACACCACCTCCGGCGATGCTATTGTCGAATATAATGTCTACGTTTTGCATTATTAA 579 0.5233 MAMATSKTLFSIFFIPLLFSTLVTAKDPRFDRSLSPKSLGLRKEKLSHLHFYFHDILSGQNPTAVRVAQAAMTATSPTLFGAVMMADDPLTVGPEPNSKVIGKAQGIYASASQNDLGLLMVLNFAFMEGKYNGSTVSLLGRNAVFSGVREMSIVGGSGVFRFARGYAQAKTFWLNTTSGDAIVEYNVYVLHY 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00279 192 PANTHER NUCLEOPORIN-RELATED 9 191 IPR004265 -
Aip06g00279 192 PANTHER DIRIGENT PROTEIN 9 191 - -
Aip06g00279 192 Gene3D - 35 183 IPR044859 -
Aip06g00279 192 Pfam Dirigent-like protein 47 189 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00279 Aip-Chr6 3224478 3225056 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00279 - - cit:102616556 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00279 06 3224478 3225056 Aip06g00279 06 3224478 3225056 ECH