Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00263 ATGGCGTCGCCCTTCATCTTCCTAATTTTCTTCTTCATATTCAGAGTGCATCATGCTATATTGGATCCCAATGATTTCTTGGCTCTTCAATCTATTCGTAAATCGCTTCACGATGTTCCTGGCTCTAACTTCTTTTCTTCTTGGGACTTCACCTCTGATCCATGCACATTCTCCGGCGTCTTCTGCCATGCCGACAGAGTCGTCGCTCTAAACCTTGGCGATCCCCGCGCCGGCTCCCCCGGCCTCACCGGAAAACTTGACCCCGCACTCTCCAAGCTCTCCGCTCTCGCCGAATTAACCGTCGTCCCCGGCCGAATCTACGGCCATCTCCCGCCCTCTCTCTCTGCACTTACCAATCTCCGATTCCTTGGCATTAGTCGTAATTTCATCTCCGGCGACATTCCGGCAGGTTTAGGCAACCTTCGCAGCCTGAGAACTCTCGATCTCAGCTACAACCAGCTCTCCGGAACAATCCCTCCGGCGATTGGAAACCTCCCGGAGCTCGTCAACGTCGTCCTCTGCCATAACCGTCTAACCGGTTCGGTTCCCAGATTCTCATCTCAAACGCTAACCCGGCTCGATCTGAAACATAACACTCTCTCCGGTTCGATCGAACCGGATTCCCTCCCTCCCTCACTCCACTACCTCTCCCTCTCATGGAACTGGTTCACTGGACCGGTAGACCGGTTACTAAGCAGGCTCAACCAGCTAAACTACCTCGACCTAAGCCTGAACCGGTTCACCGGTTCAATTCCAGCTCAACTCTTTACGTACCCCCTAACAAACCTCCAGCTCGAGAGGAACCAGTTCTCGGGTCCGGTCCAACCGGTCAACGACGTTTCGATCCAGACCGTTGATCTTAGCTATAACAGATTCTCCGGTGAGATATCGCCCATGCTGGCGAACGTGCAGTATCTTTACCTGAACAACAACGGGTTTTCCGGGCAGGTCCCTGCCAGCTTCGTTGATCGGTTGCTGGCGGCGAGTATAGAGATTCTTTATCTGCAGCATAATTACCTGACCGGAATAGCGATAAGTCCCACGGCGGAGATTCCGGTGAGCAGCTCGCTTTGCGTTCAGTATAACTGTATGGTGCCGCCGGTGCAGACGGGGTGTCCGGTGAGGTCCGGGACGCAGAAGATTCGGCCTGCTGAGGAGTGCAATCAATGGAGGGGATGA 1179 0.5394 MASPFIFLIFFFIFRVHHAILDPNDFLALQSIRKSLHDVPGSNFFSSWDFTSDPCTFSGVFCHADRVVALNLGDPRAGSPGLTGKLDPALSKLSALAELTVVPGRIYGHLPPSLSALTNLRFLGISRNFISGDIPAGLGNLRSLRTLDLSYNQLSGTIPPAIGNLPELVNVVLCHNRLTGSVPRFSSQTLTRLDLKHNTLSGSIEPDSLPPSLHYLSLSWNWFTGPVDRLLSRLNQLNYLDLSLNRFTGSIPAQLFTYPLTNLQLERNQFSGPVQPVNDVSIQTVDLSYNRFSGEISPMLANVQYLYLNNNGFSGQVPASFVDRLLAASIEILYLQHNYLTGIAISPTAEIPVSSSLCVQYNCMVPPVQTGCPVRSGTQKIRPAEECNQWRG 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00263 392 PRINTS Leucine-rich repeat signature 144 157 - -
Aip06g00263 392 PRINTS Leucine-rich repeat signature 234 247 - -
Aip06g00263 392 Gene3D Ribonuclease Inhibitor 188 278 IPR032675 -
Aip06g00263 392 Gene3D Ribonuclease Inhibitor 24 187 IPR032675 -
Aip06g00263 392 Gene3D Ribonuclease Inhibitor 279 365 IPR032675 -
Aip06g00263 392 SMART LRR_typ_2 141 165 IPR003591 -
Aip06g00263 392 SMART LRR_typ_2 300 323 IPR003591 -
Aip06g00263 392 SMART LRR_typ_2 234 258 IPR003591 -
Aip06g00263 392 PANTHER LRR RECEPTOR-LIKE KINASE 5 389 - -
Aip06g00263 392 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 5 389 - -
Aip06g00263 392 SUPERFAMILY L domain-like 45 363 - -
Aip06g00263 392 Pfam Leucine Rich repeat 187 202 IPR001611 GO:0005515
Aip06g00263 392 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Aip06g00263 392 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00263 Aip-Chr6 3083993 3085382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00263 8 342 Receptor kinase-like Gene Family AT5G62230 29.971 4.98e-37 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00263 - - gmx:100817314 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00263 06 3083993 3085382 Aip06g00263 06 3083993 3085382 ECH
Aip06g00263 06 3083993 3085382 Aip02g02861 02 104802115 104804015 PCT