Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00260 ATGGGGATCAAAGAGGACGTGGAGGATGGTGTAAAGAAGAACGGAATCAGAGAGCCATTAATTTCTGACCATGCAAGCAACAAAGGACATCCATGGATGGTTTACTTCACAACATTGGTTGCTGTCTGTGGTTCCTATGAATTTGGAACTTGTGCTGGATATTCTTCTCCTACTCAAGATGCTATTAGAACTGATCTTGGTCTATCTTTGGCAGAGTATTCTTTGTTTGGCTCCATCTTGACTTTCGGCGCCATGATTGGCGCCATAACAGCCGGACCGATTGCTGATTTGATTGGTCGAAAAGGGGCAATGAGGGTGTCAAGTGCCTTCTGTGTTGCAGGCTGGCTTGTCATTTTCTTTTCTGAGGGTCCAATACCTTTAGACATAGGGAGGCTAGCAACTGGATATGGAATGGGATCTTTTTCATATGTGGTTCCTGTCTTCATAGCAGAGATTGCACCAAAAGAACTCCGAGGTGCTCTCACTGCACTAAACCAGTTCATGATTTGTGGTGCAGTATCTGTTTCATTTGTAATTGGAAACGTACTCCCATGGAGGACTTTAGCTTTAATTGGCCTCATACCCACTGGAGTGTTGCTTTTGGGTCTTTTTATCATTCCAGAATCTCCTAGATGGCTGGCGAAGAGAGGGCGAGGAAAAGAATTCGAGGCAGCATTGCGGACGCTTCGAGGAAAAGATGCTGATATATCTCAAGAGGCAGATGAAATCCAGGATTACATAACAAGTTTAGAACAGCTCCCAAAACCAAAGCTGCTGGAATTGTTTCAGACAAGATATTTGCGCTCTGTCACAATTGGAATAGGACTTATGGTATGCCAGCAATTTGGTGGAATCAATGGAATTTGTTTCTATCTCAGCAGTATTTTTGAGCTAGCAGGATTTTCTGCATTTGCTGGAACAGTAATATATGCTTGCCTTCAGATTGTGATCACTGGCCTTGGTGCAGCTCTGATAGATAAAGCTGGCAGGAAGCCCCTATTACTGATCTCTGGAACTGGATTAGTAGCTGGTTGTATATTTACAGCAGCTGCATTCTACCTTAAGGTTCATGAAGTGGGATTGGGGGCAGTCCCTGCACTTGCTTTGATTGGCATACTGGTCTATATAGGATCATTTTCACTTGGAATGGGAGCAGTGCCTTGGGTTGTCATGTCTGAGATATTTCCTATCAACATAAAAGGGCTGGCAGGGAGTGTAGCTACATTAGTAAACTGGTTTGGTGCTTGGTTATGCTCTTATACCTTCAACTTTCTCATGAGCTGGAGCTCCTATGGTACCTTTATTGTTTATGCTGCAATCAATGCAGTGGCCATAGTGTTTATAATTGTAGTGGTGCCAGAAACTAAGGGGAAAAGCCTTGAAGAATTACAAGCTTCCATTAATGCGTAG 1410 0.4348 MGIKEDVEDGVKKNGIREPLISDHASNKGHPWMVYFTTLVAVCGSYEFGTCAGYSSPTQDAIRTDLGLSLAEYSLFGSILTFGAMIGAITAGPIADLIGRKGAMRVSSAFCVAGWLVIFFSEGPIPLDIGRLATGYGMGSFSYVVPVFIAEIAPKELRGALTALNQFMICGAVSVSFVIGNVLPWRTLALIGLIPTGVLLLGLFIIPESPRWLAKRGRGKEFEAALRTLRGKDADISQEADEIQDYITSLEQLPKPKLLELFQTRYLRSVTIGIGLMVCQQFGGINGICFYLSSIFELAGFSAFAGTVIYACLQIVITGLGAALIDKAGRKPLLLISGTGLVAGCIFTAAAFYLKVHEVGLGAVPALALIGILVYIGSFSLGMGAVPWVVMSEIFPINIKGLAGSVATLVNWFGAWLCSYTFNFLMSWSSYGTFIVYAAINAVAIVFIIVVVPETKGKSLEELQASINA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00260 469 ProSitePatterns Sugar transport proteins signature 1. 321 338 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aip06g00260 469 PRINTS Sugar transporter signature 128 147 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip06g00260 469 PRINTS Sugar transporter signature 280 290 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip06g00260 469 PRINTS Sugar transporter signature 369 390 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip06g00260 469 PRINTS Sugar transporter signature 392 404 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip06g00260 469 PANTHER - 30 467 - -
Aip06g00260 469 SUPERFAMILY MFS general substrate transporter 28 463 IPR036259 -
Aip06g00260 469 ProSitePatterns Sugar transport proteins signature 1. 91 108 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aip06g00260 469 Gene3D MFS general substrate transporter like domains 27 468 IPR036259 -
Aip06g00260 469 ProSiteProfiles Major facilitator superfamily (MFS) profile. 33 456 IPR020846 GO:0022857
Aip06g00260 469 Pfam Sugar (and other) transporter 45 464 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aip06g00260 469 TIGRFAM SP: MFS transporter, sugar porter (SP) family 24 462 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip06g00260 469 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 30 467 - -
Aip06g00260 469 CDD MFS_GLUT6_8_Class3_like 35 462 IPR044775 GO:0008643|GO:0051119
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00260 Aip-Chr6 3035728 3039877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00260 1 468 Organic Solute Cotransporters AT5G18840 58.246 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00260 K03444 - gmx:100785248 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00260 06 3035728 3039877 Aip06g00260 06 3035728 3039877 ECH