Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00250 ATGAATTTCTTTAAATCCATTCTCTCCGACGATCCAGATCCCCCTGGATCCGAATCTGAATCCGACAATGCGTCTCACCCGCAAAACGCAACCGATCCTGATCCCTCCTCATCCGACGCCGCCACGGCCACCACCGACCACAGTGACGGCGTCGATGGCAGCGGGTGGATTCGGTTCGGTGGCCTGATCAAAACCCTAACCTCCAAATCCGAATCGATAATCGAGACGTATCGCCGGGACCTCCAAGAATTCGGCACGGGACTCAAGAAGGAGATCGAGGTCGCCCATGGCTCCCTCGAGACGGTGGGCCAGGCCATCGATCAGTTGGGATCTACTGTTGTCAAAGGAACGGCCCAGATCATCTCCCAAGGTAAGGAAGCAATCCTAGCCGCCGATCTCGATTCCGATAACAATAGCAACAGAAGCACTAAAAGCCCTAGCAAAGATGGTAGTAGCTCGAATTTGAAAGGGTATAGTAGGTTTGAAGCTCAGATTCGTGCTATTCAGGGTGATGCTAGCACTTACACTGATGAGCCTGAGGATTTGGAAGAGTATGGAAAATGGAAATTAGGGTTTTCGTTGGAAGGGAAGGATAAGGAATTGGAGGGTTTGCTTAGTGAGAATGAGGCTATGGAGAGTATTTACAAGAGGCTTGTTCCGAATAGCGTGGATAACGAGAGTTTCTGGTTAAGGTATTTCTATAAGGTGTATAAGCTGAAGAAAGCTGAGGATGTGAGGGCTAGACTTGTGACGACAATGTCAAGGGAAGAGGAGGATTTGAGTTGGGATGTAACAGATGTTGAAGATGATGATGATGAGGAGGAGGAGGAGGAGGGAGAAGAGAATGTGGGTCATGGTAAATCAAAGGGTGTGATTGATAAGGAGGTTAGTGCTGAAACTTTGGCAATTGAGGGGAATTCTGAGTTGCAAGGTGGTAAATTTGGTGAAAAGGGTGTGGTCGAAACAAAGAGATTGAGTGTGGAAGTGGGGGGGAATAGTTCATTGCAAAGTGAAAGTAAGGAACATGGCAATGATTCTGTTGGGGAAACTAAAGTTGAGAGTTCAGTGATTGCTCAAAAGGCGGATGATGGAAGCAACTCATGCAAGGAAGTCGTGAAGGAAGTGGTTGAATCTGGGAAGAATAGTGATTATGCAGCTGGTTCTGATGAGAAAGTGATAGTGGAAACAAAAGTTGATGATGGAAAACCTTCGGTGGTTGAGGCAAGTAAGAGCCCGGCACACGAGGAAGAGGAGGATCTCGGTTGGGATGAGATTGAGGATCTCAGTAGTATTGATGAAAAGAAGACAAGTCCACCTCGGAGTGGAAGCCCAAGCAAAATTGATGTGCGGAAGCGGCTGAGTGTTGCAGAGGAAGAAGAAGACTTGAGTTGGGACATTGAAGATGATGATGATGATGCTGTTAAGTCTTGA 1431 0.4738 MNFFKSILSDDPDPPGSESESDNASHPQNATDPDPSSSDAATATTDHSDGVDGSGWIRFGGLIKTLTSKSESIIETYRRDLQEFGTGLKKEIEVAHGSLETVGQAIDQLGSTVVKGTAQIISQGKEAILAADLDSDNNSNRSTKSPSKDGSSSNLKGYSRFEAQIRAIQGDASTYTDEPEDLEEYGKWKLGFSLEGKDKELEGLLSENEAMESIYKRLVPNSVDNESFWLRYFYKVYKLKKAEDVRARLVTTMSREEEDLSWDVTDVEDDDDEEEEEEGEENVGHGKSKGVIDKEVSAETLAIEGNSELQGGKFGEKGVVETKRLSVEVGGNSSLQSESKEHGNDSVGETKVESSVIAQKADDGSNSCKEVVKEVVESGKNSDYAAGSDEKVIVETKVDDGKPSVVEASKSPAHEEEEDLGWDEIEDLSSIDEKKTSPPRSGSPSKIDVRKRLSVAEEEEDLSWDIEDDDDDAVKS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00250 476 Gene3D BSD domain 149 250 IPR035925 -
Aip06g00250 476 MobiDBLite consensus disorder prediction 328 476 - -
Aip06g00250 476 PANTHER SYNAPSE-ASSOCIATED PROTEIN 94 470 - -
Aip06g00250 476 PANTHER SYNAPSE-ASSOCIATED PROTEIN 1 94 - -
Aip06g00250 476 Pfam BSD domain 188 244 IPR005607 -
Aip06g00250 476 ProSiteProfiles BSD domain profile. 188 240 IPR005607 -
Aip06g00250 476 Coils Coil 239 259 - -
Aip06g00250 476 MobiDBLite consensus disorder prediction 133 155 - -
Aip06g00250 476 MobiDBLite consensus disorder prediction 260 292 - -
Aip06g00250 476 SUPERFAMILY BSD domain-like 157 245 IPR035925 -
Aip06g00250 476 MobiDBLite consensus disorder prediction 18 49 - -
Aip06g00250 476 MobiDBLite consensus disorder prediction 1 56 - -
Aip06g00250 476 SMART wurzfinal6 188 240 IPR005607 -
Aip06g00250 476 MobiDBLite consensus disorder prediction 390 417 - -
Aip06g00250 476 MobiDBLite consensus disorder prediction 445 459 - -
Aip06g00250 476 MobiDBLite consensus disorder prediction 132 155 - -
Aip06g00250 476 PANTHER PROTEIN, PUTATIVE-RELATED 1 94 - -
Aip06g00250 476 PANTHER PROTEIN, PUTATIVE-RELATED 94 470 - -
Aip06g00250 476 MobiDBLite consensus disorder prediction 261 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00250 Aip-Chr6 2961718 2963523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00250 - - aip:107645366 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00250 06 2961718 2963523 Aip06g00250 06 2961718 2963523 ECH
Aip06g00250 06 2961718 2963523 Aip02g02849 02 104572694 104574267 PCT