Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00243 ATGCATTCGGGCTTGGGCGGGGCCTCGGGGGGCAATTATGGAATAACAGAAAATCTTCATATATACGTATACGTTTACATCAACTTGAGTGCTTGGTTCCCATTTTCTACTGCACTCTCTTCCTTTGTTCTCAAAATGTTGTTCTTCTCGTACTTCAAGGATTTGGTGGGAAGAGAAGTAACGGTGGAGCTCAAGAACGATTTGGCCATAAGGGGCACTCTTCACTCCGTTGACCAGTACCTCAACATCAAGCTCGAGAACACTCGCGTCGTTGACCAAGACAAGTACCCCCATATGCTTTCTGTGAGGAACTGCTTCATCAGAGGTTCAGTGGTCAGATACGTGCAATTACCTCCAGAAGGCGTGGACGTTGAACTATTGCACGATGCCACTAGGAGAGAAGCTCGGGGTGGTTAA 417 0.4748 MHSGLGGASGGNYGITENLHIYVYVYINLSAWFPFSTALSSFVLKMLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDVELLHDATRREARGG 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00243 138 PANTHER SNRNP CORE PROTEIN FAMILY MEMBER 46 136 IPR016654 GO:0006397
Aip06g00243 138 SMART Sm3 50 117 IPR001163 -
Aip06g00243 138 CDD LSm2 47 135 IPR016654 GO:0006397
Aip06g00243 138 Pfam LSM domain 52 116 IPR001163 -
Aip06g00243 138 Gene3D - 39 137 - -
Aip06g00243 138 SUPERFAMILY Sm-like ribonucleoproteins 48 137 IPR010920 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00243 K12621 - vvi:104879775 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00243 06 2844324 2847472 Aip06g00243 06 2844324 2847472 ECH