Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00242 ATGGCGGTTCCCGCGCAAACCAGCGCTACTGATCAACCGAGCCTCTGGGACGCGGTGCTTCGGCACACTGAGCTGGCTCAGCAACGGAACTCCGACCCTAACCTGTGGGCCTCGGAGCTCGCCGCCATGCTCCGATCCTCCACCGTGATCCTTCCTTCCGTGGAGCTCGCCCACCACCTCGTGTCTCATTTCTTCTGGAAGAATCACTGCCCCGCCGCGTGGAAGTTTCTAGAAAGAGCCATCTCTCTCAACATCGTCCCTCCCTTGCTCCTCCTCGCTCTTCTCTCCGCCACGGTTGTTCCAAGCAGGCAACTCCATCCAGTAGCTTACAGACTTTATATGGAACTCCTAAAGCGAAATGTTTTTATGCTCGCCTCTCATATCAATTCCCCAAACTATGAAAAGATTATGACATCAATTGATGAAGTTCTTCTTCTCTCCCAAGTATATAACCGAAAGGATTGTGAGCCTGGAGTTGTTCTAGTTGAGTTTGTCTTCTCAATTGTTTGGCAGTTACTTGAAGCAGTACTAGATGATGAAGGATTACTGGATCATGCATCGGAGGATAATCCTAGATGGCTAAGGAGGTCAGATGATATGAATATTGGAAGTCCTGATTGCTTCACTGGAAAAAAAACTGAGCAAAAGGGGGAATTGCAGAGAGAAAATACAGCAATGGCTATTGAGATCGTTGCAGAATTTTTGCAAAACAAAATTACTTCAAGGATCCTTTCCTTAGTTCATCAAAACATGCCATCTCATTGGGGATTTTTCATTCGCCAAATGCATCTGCTTGTATCAAACTCTTCAGTTTTGAGGAGCTCAAAACATATTACTCCGGAGGCCCTTTTGCTTTTAATGGAAAATATCTATAAAGGCATATCTCATCAAAGCAAAACAACATCTAAGGCTAATGCGTTCATGGTTGCTGGTTCTCAGATCTTTTTTGCTGGTCAATCTTTTGGTGATAGTTGTTCTTTGCAATGGCTTCCTATTGATCTTATCCTTGAAGATGCTTTGGGTGGAGCTAATGTCTCAGCACTTAGTGCTATTAAAATTGTTACTGGTTTGGTGAAGGTTTTACATGCTGTAAATGGAAGTACTTGGCACAGTGCATTTTTAGGTTTATGGATTGCAGCATTGCGGTTGGTTCAAAGGGAGAGGGATTCAACTGAAGGTCCTGTACCTCGCCTTCATACTTGCATGTGTATGTTATTGAGCATTATAACCCTTGTGGTCGCTCATATTATTGATGAAGAGGAAAGTGAATTGATTGAGGAAGCTGAATGTAGCCCTGCCAATCAAAGAAAAGATAAACCAACTTTGGGGAAGTGTCGTGGAGAATTGATTGCCAGCTTACAGCTATTGGGTGATTATGAGTTCTTACTGACTCCACCTCAATCTTTTTTTTCGGAAGCCAATAAAGCTGCTGCCAAGGCTATTATGTTCTTAGCTGGAAACTCCGTTGGCAGTGAGGTCTTAGAGAGTATAAGCGTGAATGACTTACCGACAAAATGCTCTGGCAACTTATGGCATCTAATCGTTGAGGCTTGCATTGCAAGAAACCTACTTGATACATCAGCTTATTCTTGGCCTGGCTATGTCAATGCATGCAGCAATCAAATTCCTTGTAGCACTTCTAGCCAGGTGGCTGGGTGGTCTTCATTAATGAAGGGATCACAGCTAACTCCTGAATTGGTTGATGTACTAGTTGTAACTCCAGCTTCCAGCTTAGCAGAGATTGAGAAAATATATGAAATTGCAACCAATGGTTCAGACGAAGAGAAGATATCTGCTGCCACTATCCTCTGTGGGGCATCTTTAGTACGAGGATGGAATGTACAGGAGCACACCATTCTTTTTATGACAAGTTTGCTCTCACCTCTGGTTCCTCCAACTGAAAGCCATTTGATCAGCCAAGCTCAATTTCTCAATGTCCTTCTTATTGGAATTTCATCACTAGATTGTGTTCATATTTTCTCTCTTCATGGTTTGGTTCCATTACTTGCAGCAGGGTTAATGCGAATATGTGAGGTTTTTGGATCATGTGTTCCCGATGTCTCACAGACTCTTTCAACTGGAGAAGAACTCTCTTTTCATGAGGTGTTCTCAAATGCATTCACTCTTTTGCTGAGGTTCTGGCGGTTTGATGTTCCATCTATTGAACATGTGCGGAGGGATTCTGCTACTCCACCACTTGGGTCACTATTTTGTCCTGATTCCCTTTTATTGGTTCGAAACTTTCTATTGGCATCTTTTGGAAGATCAGCAAAGGATCAAATAACGCGCAAAAGATTTTCAAAATATATAACCTTTCCTACTGAACCAGTATTTTTGGATTCCTTTCCAAAATTCAACTTCTGGTATCAGCAACATCAGGAATGCATTGTTTCAATCCCGTCTGGTCTTGTCCCTGGAGGGCCTGTGCATCAGATTGTTGATGTTCTACTATGCACGTTATTTAGGAAGATAAATAGTTGTGATGAACCTTTGGCATGTAGCAATTCAGGAAGCAGCGGTTCACCTGGGTCTGCACTGAATGAAGCTATCATGAAACTAAAGGTACCTGCGTGGGATATACTTGAGGCCATTCCGTTTGTGCTGGATGCTGCTTTGACGGCTTGTGCTCATGGAAGACTTTCTACACGTCAACTAGCTACAGGCCTCAAAGATCTGGCTGATTTTCTGCCAGCATCTTTGGTTACAATTGCAAGCTATTTATCAGCTGAAGTTAGACGCGGAATATGGAAGCCAGGTTTTATGAATGGAACTGATTGGCCTAGCCCTGCTGCAAATTTATCCCTTGTTGAGCAGCAGATAAAGAAAATTTTAGCCACCACAGGTGTTGATGTTCCAAGCCTTGCTGTAGATGGGGACTTTCAAGCTACGTTGCCTTTGCCTTTGGCAGCTTTTGTAAGCCTCACATTAACATATAAACTTGACAAAGACACTGGGCGGTTCCTTAGCCTGATTGGCCCAGTTATGATTGCTCTTGCTTCTAGTTGCCCCTGGCCGTGCATGCCCATTGTAGCTTCTTTGTGGGTCCAGAAAGTGAAGCGTTGGAGTGATCACCTTGTGCTCTCTGCTTCCAGAACAGTCTTCCACTGCAACAAGGATGCTGTAGTTCAACTACTAAGAAGTTGCTTCAAATCCACACTTGGGCTTGGCTCTGCCTGTTTACATAATAATGGTGGTGTTGGTGCTCTCCTTGGTCATGGTTATGGCGTTGGTGTCAATTCCAAAACATCTGACGGGGTCTCTCCGATTGCTCCAGGAACTATTTGCTTGAAAGTGTACCAGTATATTGGAGATACCAGGTACTTGTCTGAAGAAATTGTCTCTATTCTAATGCAAACAGTGAGAGGTATAGTAAGTAATCAATTACTCAAGGGGGATGGTAAGAAGCAAAAGAAAATCAAGTATGGAACGACACATGGACATGTTTCTCTTGCTAGATCCAAGGCACGGGTCAAGCATGCTGCTCTACTGGCAGCTTCATTGGTTTGGATATCGGGTGGAATAAAGTTGGTTCAATATTTCATAAAAGAGACTATTCCTAAATGGTTCTTTTCTTCTAGTATGTTGGAGCTGGATGGTGAAGAATCCAGTGCCTTGGTTGCTATGCTTAGAGGTTATGCATTAGCATTTTTTGTCATGCTCAGCGGGGCATTTGCCTGGGGCATTGACCATTCACTTCTATCAAGACAAAGAGGAAAGGTTATGGGGCTGCATTTTGAATTCATTGCAAGTGTCCTTCAGAAGAATATACCACTGCGTTGTCAGGATGCTACTTGGCGAGCCTATGTGTCAGGATTTCTGAGCCTGATTGTGAGTTGCACTCCATTGTGGGTCAGCGAAATCGATGTTGATATATTGAAGAGACTAAGCAAGGGATTAATACAGATGAATGAGCATGAGTTGGCTCTTAGGCTTTTGGAGAAAGGAGGGATTGGCGCCATGGGTGCAGCAGCTGAAATGATTGTTGCATTTCAACATAGATTTTAA 4005 0.4345 MAVPAQTSATDQPSLWDAVLRHTELAQQRNSDPNLWASELAAMLRSSTVILPSVELAHHLVSHFFWKNHCPAAWKFLERAISLNIVPPLLLLALLSATVVPSRQLHPVAYRLYMELLKRNVFMLASHINSPNYEKIMTSIDEVLLLSQVYNRKDCEPGVVLVEFVFSIVWQLLEAVLDDEGLLDHASEDNPRWLRRSDDMNIGSPDCFTGKKTEQKGELQRENTAMAIEIVAEFLQNKITSRILSLVHQNMPSHWGFFIRQMHLLVSNSSVLRSSKHITPEALLLLMENIYKGISHQSKTTSKANAFMVAGSQIFFAGQSFGDSCSLQWLPIDLILEDALGGANVSALSAIKIVTGLVKVLHAVNGSTWHSAFLGLWIAALRLVQRERDSTEGPVPRLHTCMCMLLSIITLVVAHIIDEEESELIEEAECSPANQRKDKPTLGKCRGELIASLQLLGDYEFLLTPPQSFFSEANKAAAKAIMFLAGNSVGSEVLESISVNDLPTKCSGNLWHLIVEACIARNLLDTSAYSWPGYVNACSNQIPCSTSSQVAGWSSLMKGSQLTPELVDVLVVTPASSLAEIEKIYEIATNGSDEEKISAATILCGASLVRGWNVQEHTILFMTSLLSPLVPPTESHLISQAQFLNVLLIGISSLDCVHIFSLHGLVPLLAAGLMRICEVFGSCVPDVSQTLSTGEELSFHEVFSNAFTLLLRFWRFDVPSIEHVRRDSATPPLGSLFCPDSLLLVRNFLLASFGRSAKDQITRKRFSKYITFPTEPVFLDSFPKFNFWYQQHQECIVSIPSGLVPGGPVHQIVDVLLCTLFRKINSCDEPLACSNSGSSGSPGSALNEAIMKLKVPAWDILEAIPFVLDAALTACAHGRLSTRQLATGLKDLADFLPASLVTIASYLSAEVRRGIWKPGFMNGTDWPSPAANLSLVEQQIKKILATTGVDVPSLAVDGDFQATLPLPLAAFVSLTLTYKLDKDTGRFLSLIGPVMIALASSCPWPCMPIVASLWVQKVKRWSDHLVLSASRTVFHCNKDAVVQLLRSCFKSTLGLGSACLHNNGGVGALLGHGYGVGVNSKTSDGVSPIAPGTICLKVYQYIGDTRYLSEEIVSILMQTVRGIVSNQLLKGDGKKQKKIKYGTTHGHVSLARSKARVKHAALLAASLVWISGGIKLVQYFIKETIPKWFFSSSMLELDGEESSALVAMLRGYALAFFVMLSGAFAWGIDHSLLSRQRGKVMGLHFEFIASVLQKNIPLRCQDATWRAYVSGFLSLIVSCTPLWVSEIDVDILKRLSKGLIQMNEHELALRLLEKGGIGAMGAAAEMIVAFQHRF 1334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00242 1334 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 33A 25 1333 - -
Aip06g00242 1334 PANTHER OS07G0681500 PROTEIN 25 1333 IPR039638 GO:0016592|GO:2000762
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00242 Aip-Chr6 2833161 2842783 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00242 - - qlo:115972435 1574.68