Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00240 ATGGCGACTCTAGGGGATATTTGTGTTTCCGCGGCCGTCAATCTCTTGTCTGCAATTGCATTCTTGCTGGCTTTTGCAATATTACGACTTCAACCCATTAACGATAGGGTCTACTTCCCAAAATGGTATCTGAAGGGAATAAGAGGAAGCCCAACAAGTTCCAGAACAGCAGTTGGAAAATTTGTTAACCTGGACTACAGTTCCTATCTCAGGTTCTTGAATTGGATGCCTGCAGCATTGCATATGCCAGAGCCAGAACTTATAGATCATGCAGGGCTTGACTCAGCAGTGTATATTCGGATTTATCTGCTTGGGTTGAAAATATTTGCCCCAGTTGCCGTACTTGCTTTTGGGGCTTTGGTTCCCGTTAACTGGACTGGGAGAAGATTGAATGCATCAAAATCCAAGGAGTTGACATTTAGCAATATTGACAAGCTTTCGATATCAAATGTTCCAGATGGATCAAAGAGGTTTTGGGTTCATATTGGTATGTCATATCTCTTCTCTTTTTGGACATGCTTTACTCTTTACAGAGAATACAAGATTATAGCAGCAATGAGATTGCGATTTTTGGCATCTGAACGTCGTCGTCCAGACCAATTTACTGTCCTAGTGAGGAACGTTCCACCAGATCCTGATGAATCTGTTAGTGAGCACATTGAGCATTTTTTTTGTGTCAATCATCCTGATCACTATCTGATGCATCAGGTTGTATATAATGCAAACAAGCTTGCTGCAATAGTTGCAAAGAAAAGGGCAATGATAAACTGGCACATTTACTACGAAAACAAATATGAAAGGAATCCTTCGCAAAGGCCAGTTACTCGGACAGGTATGCTCGGTATCTTCGGGAAAAAAGTGGATGCTATTAATCATTATACTTCGCTAATTGATAACTTGAGCAAACAAGAAGAGGAAGAAAGACAGAAAGTTAGAAATGATCCCGATGCTATTGTTCCTGCAGCATTCGTTTCATTCAAAACCCGATGGGGAGCAGCTGTATGTGCTCAAACTCAGCAAACTAGTAATCCTACTGTTTGGCTCACAGAATGGGCTCCTGAGCCTCGAGATGTCTATTGGGATAATCTAGCCATTCCATATTTGGATCTCAATCTTCGAAAATTGCTCATGACTGTTGCTATGTTTTTCTTAACTTTCTTCTTTATGATACCAATAGCATTGGTCCAATCTCTAGCCAACATTGAGTCCATCAAGCATGTCTTTCCTTTCTTGGCGTCGTTAGTTGAGAAGCCATCTGTAAAGAATTTTATTCAAGGATTTCTGCCAGGGCTAACATTAAAGATATTTCTTATTTTCCTCCCTAAAATTCTCATGACAATGTCCAAAATAGAAGGTTTTACATCGCTTTCAGGTTTAGACCGGAGGTCAGCATCCAAATATTACTTATTTATTCTTGTCAATGTGTTCCTTGGAAGCGTTGTAACAGGAACCGCATTTCAGCAACTTGAACAACTTATTGATCAGCCCTCTACAGAGTTCACCAAAACTGTTGGCAGTACAATCCCTATGAAAGCAACATTTTTCATCACATATGTAATGATTGATGGATGGGCTGGAATTGCTGCAGAGGTCCTCAGATTAACTCCGTTAATTATGTTCCACCTGAAAAACACATTCCTGGTGAAGACAGAGCTGGACAGACAAGCTGCTATGGACCCTGGTTGCTTGGATTTTTCCATATCTGAACCTCGAATACAGTTATATTTCATGCTAGGACACGTCTATGCCCCAGTTACGCCTTTACTTCTCCCCTTCATTGTAGTATTCTTCGCCTTTTCCTACTTGGTCTTTCGGCATCAAATTATCAATGTGTATAACCAGCACTACGAGAGTGGAGCAACATTTTGGCCAGATGTCCACCGTCGAGTTCTTACCGGATTGATTATATCCCAGATTCTTTTGATGGGGTTGCTCAGTACCAGAGGCACTAACAAGATCACGCTAGTGCTTATTGGACAACCCATCTTGACATTCTGGTTCTACAGATATTGCAAAGGCCGCTTTGAATCAGCATTCATAAAGTTCCCACTAGAGGAAGCTATGGTGAAGGATACGCTTGAACGGGCTGTTGAGCCAACCTTGAACCTGAGAATATATCTTCAAGATGCTTATGTACACCCAGTTTTTAAGAGAAGTGAGTTGGAAAAACCAATGGCCGTTGATGATGAAGAAGAGAATCCTCTCATTCAAACAACTAGAGCGTCTCGTCTGAGTAGCATGCCAGAATCTGATAATGAAGCATATCATTTCAATCATTATCTCATAAAATCACCAGGAACCGCTTCTATGGCGAATCTGGTGCATTCATTCACACTGATTCCTTGCAACCCATATAAATACCGAACCAAAGTTTCATGCTTTCACAAATCCTTTAACCAGACAAAGGACCAATTCGTTATTCGAGGGTTGCAAAACCCCATTCAACCCTTTTCGCGTAATTTCACCTCAAAATTGGGTGCCACGTCAAGGTTATCCGTTGAGCATAAACTGAATGCCGTAGCTTCCGAATCTGAGGATCTGAAGAGGACGTTGAGCTATTTGTTCAGGACAGAGATTGGTGGCGGTTTGGTTAGAGTTTATGTCACAAAGAGTAATAACCACCTTAGGTATTCTGTTTTGATTGAGGTTTCTTCGTTGGATTTAAGGGTTAGTGGCCAAGGTGAAAAGAGGCTTGTGTTGTGTTGGGGTGTGTATAGAGACGATTCGTCGTGTTTTGTGGAGTTGGATTCGAAGAATTCGGGTGGGGATGCTGGGGCGGGGATGAATCTAAGCCAGTTTAAGCAGAATTCTGCTGAGAAGTTTGTGGTTGAGTTGGATTTTGATGCTAAGCAAGTTCCATTGTACTTATCATTTTATTTTAAGTCTCTGTTAGGTGATGATGAGACTAGTGGATTGGAGATCAGAAGCCATAGGAGAACAAATTTTTGTGTTCCTGTCGGTTCTCTTCCAGGATACCCAGCTCCTCTAGGTCTGTCTTTTAGTCCTGATGGTTCTATGAACTTTGCCCTTTTCTCAAGGCATGCAGAGGGTGTTGTTTTGTGTTTGTATGATGACACTGGTGTGGAGAAACCTGCCTTGGAGCTTGATCTGGATCCTTATGTCAATCGATCAGGTGATGTTTGGCATGTCGCATTTGAGAGTGCCTGGACTTTTGTGAGCTATGGTTATCGCTGCAGGGGGGATCTTGTGGGGAGAGACAAGGATGATGATGATGCCATGCGTGTTCTTTTGGACCCTTATGCTAAGATCATTGGGAATTTTTTTCCTGATGGTCATGGATTAGTGAGGAATCTTGGACAGTTGGGGAAGGAGCCTGCTTTCGACTGGGGTGATGATTACCGTCCGAATTTGTCCATGGAAAAGCTAGTGGTCTATAGGTTGAATGTCAAGTGCTTTACGCAGGATATGTCCAGTCAACTTCCTAGTAATTTAGCCGGGACCTTTTCTGGTTTGGCTAACAAGGTGAAGTATCTCAAAGATCTGGGTGTGAATGCCATTTTGCTGGAGCCAGTTCTCACATTTGATGAGAATAAAGGACCATATTTTCCTTGTCACTTTTTCTCTTTAATGCACATATATGGGCCATCTGGTGATCCTGTGTCCACTATCAATTCTATGAAGGAGATGGTTAAAACTATGCATGCCAATGGTATAGAAGTTCTTATGGAAGTTGTGTTTGCCCATACTGCTGAGGCTGGTGCTCTGCAAGGAATCGATGACTTATCGTACTATTTTCTAAATGGAGTCGATGATCCGGATACACAGGGTGCTTTGAAATGTAACTATCCTGTAGTGCAAAGTTTGATTCTGGATAGCCTTCGTCATTGGGTGACTGAGTTTCACATTGATGGCTTCTCTTTCATAAATGCTTCTAATCTGTTGAGGGGTTCTCATGGGGAATACTTGTCTCGACCTCCATTGGTTGAAGCAATCGCTTTTGATCCAGTACTCTGGAAGACTAAAATCATTGCAGATTCCTGGGATCCCCATGGTATGGTAGCAAAGGGAACCCACTTTCCCCATTGGATGAGATGGGCTGAAATAAATACAAAATTTTGTCATGATGTGAGAAACTTCTTGAGGGGTGAAAGTCTTATCAGTAACCTCGCAACAAGACTTTGTGGGAGTGGAGACATGTTTTCTAATGGACGAGGCCCGGCATTTGCTTTCAATTATGTTGCCAGGAATTTTGGACTTTCTCTTTTGGACTTGGTCAGCTTTAGTAGTGGTGAACTAGGTGCAGAGTTGAGTTGGAATTGTGGAGAAGAAGGACCTACTAACAACGTCGTTGTGCTTGAAAGACGACTCAAACAAATCCGTAATTTCCTCTTCATCTTGTTTGTGTCCTTAGGAGTACCTGTTCTGAACATGGGAGATGAGTGTGGTCAGTCTTTTGATGGTTCTCCTGCATACAGTGTCTTTAAACCTTTCAATTGGAGTGCCTTGCAAACAGGTTTTAGCAAACAAACAACACAATTTGTTTCCTTTTTAAGTTCACTCAGAAAGAGGCGGAGTGATCTTCTTCAAAGTAGCAGCTTTTTAAAGGAAGAAAACATAGAGTGGTACGGAAGCAACCGGGATCCACCACAATGGGAAGACCCAACCTGCAAGTTCCTTGCAATGCTTCTGAAGGCAGAAAAACCAGAGCTCCCAGAAAACCCTTTACCTACTGACATATCAGGGGACTTATTTCTTGCTTTCAATGCAGCTGATAATTCAGAAACCTTAGTTCTACCTGTGCCCCCGGAAGGGATGTCGTGGTACCGTTTAGTCGATACGTCTCTTCCGTTTCCTGGTTTTTTCTTAACCGATGGTGAACTTGTCCCTGAGCAGACAGCAGGATTGTTTACTTACCTAATGAGGTCTCACAGCTGCACTTTATTTGAGACAAGCAATAAGAGAAGCTAA 4929 0.4224 MATLGDICVSAAVNLLSAIAFLLAFAILRLQPINDRVYFPKWYLKGIRGSPTSSRTAVGKFVNLDYSSYLRFLNWMPAALHMPEPELIDHAGLDSAVYIRIYLLGLKIFAPVAVLAFGALVPVNWTGRRLNASKSKELTFSNIDKLSISNVPDGSKRFWVHIGMSYLFSFWTCFTLYREYKIIAAMRLRFLASERRRPDQFTVLVRNVPPDPDESVSEHIEHFFCVNHPDHYLMHQVVYNANKLAAIVAKKRAMINWHIYYENKYERNPSQRPVTRTGMLGIFGKKVDAINHYTSLIDNLSKQEEEERQKVRNDPDAIVPAAFVSFKTRWGAAVCAQTQQTSNPTVWLTEWAPEPRDVYWDNLAIPYLDLNLRKLLMTVAMFFLTFFFMIPIALVQSLANIESIKHVFPFLASLVEKPSVKNFIQGFLPGLTLKIFLIFLPKILMTMSKIEGFTSLSGLDRRSASKYYLFILVNVFLGSVVTGTAFQQLEQLIDQPSTEFTKTVGSTIPMKATFFITYVMIDGWAGIAAEVLRLTPLIMFHLKNTFLVKTELDRQAAMDPGCLDFSISEPRIQLYFMLGHVYAPVTPLLLPFIVVFFAFSYLVFRHQIINVYNQHYESGATFWPDVHRRVLTGLIISQILLMGLLSTRGTNKITLVLIGQPILTFWFYRYCKGRFESAFIKFPLEEAMVKDTLERAVEPTLNLRIYLQDAYVHPVFKRSELEKPMAVDDEEENPLIQTTRASRLSSMPESDNEAYHFNHYLIKSPGTASMANLVHSFTLIPCNPYKYRTKVSCFHKSFNQTKDQFVIRGLQNPIQPFSRNFTSKLGATSRLSVEHKLNAVASESEDLKRTLSYLFRTEIGGGLVRVYVTKSNNHLRYSVLIEVSSLDLRVSGQGEKRLVLCWGVYRDDSSCFVELDSKNSGGDAGAGMNLSQFKQNSAEKFVVELDFDAKQVPLYLSFYFKSLLGDDETSGLEIRSHRRTNFCVPVGSLPGYPAPLGLSFSPDGSMNFALFSRHAEGVVLCLYDDTGVEKPALELDLDPYVNRSGDVWHVAFESAWTFVSYGYRCRGDLVGRDKDDDDAMRVLLDPYAKIIGNFFPDGHGLVRNLGQLGKEPAFDWGDDYRPNLSMEKLVVYRLNVKCFTQDMSSQLPSNLAGTFSGLANKVKYLKDLGVNAILLEPVLTFDENKGPYFPCHFFSLMHIYGPSGDPVSTINSMKEMVKTMHANGIEVLMEVVFAHTAEAGALQGIDDLSYYFLNGVDDPDTQGALKCNYPVVQSLILDSLRHWVTEFHIDGFSFINASNLLRGSHGEYLSRPPLVEAIAFDPVLWKTKIIADSWDPHGMVAKGTHFPHWMRWAEINTKFCHDVRNFLRGESLISNLATRLCGSGDMFSNGRGPAFAFNYVARNFGLSLLDLVSFSSGELGAELSWNCGEEGPTNNVVVLERRLKQIRNFLFILFVSLGVPVLNMGDECGQSFDGSPAYSVFKPFNWSALQTGFSKQTTQFVSFLSSLRKRRSDLLQSSSFLKEENIEWYGSNRDPPQWEDPTCKFLAMLLKAEKPELPENPLPTDISGDLFLAFNAADNSETLVLPVPPEGMSWYRLVDTSLPFPGFFLTDGELVPEQTAGLFTYLMRSHSCTLFETSNKRS 1642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00240 1642 Pfam Calcium-dependent channel, 7TM region, putative phosphate 373 645 IPR003864 GO:0016020
Aip06g00240 1642 SUPERFAMILY E set domains 990 1122 IPR014756 -
Aip06g00240 1642 SUPERFAMILY (Trans)glycosidases 1112 1514 IPR017853 -
Aip06g00240 1642 CDD AmyAc_plant_IsoA 1125 1516 IPR044096 GO:0019156|GO:0019252
Aip06g00240 1642 CDD E_set_GDE_Isoamylase_N 995 1133 IPR044505 -
Aip06g00240 1642 Pfam Cytosolic domain of 10TM putative phosphate transporter 200 362 IPR027815 -
Aip06g00240 1642 Gene3D Glycosidases 1110 1523 - -
Aip06g00240 1642 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 3 745 IPR045122 GO:0005227
Aip06g00240 1642 Coils Coil 290 310 - -
Aip06g00240 1642 Pfam Alpha amylase, catalytic domain 1153 1240 IPR006047 GO:0005975
Aip06g00240 1642 SMART aamy 1137 1511 IPR006047 GO:0005975
Aip06g00240 1642 PANTHER OS05G0393800 PROTEIN 3 745 - -
Aip06g00240 1642 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 995 1088 IPR004193 GO:0004553|GO:0005975
Aip06g00240 1642 Gene3D - 1524 1642 IPR013780 -
Aip06g00240 1642 Gene3D Immunoglobulins 983 1099 IPR013783 -
Aip06g00240 1642 Pfam Late exocytosis, associated with Golgi transport 7 179 IPR032880 -
Aip06g00240 1642 SUPERFAMILY Glycosyl hydrolase domain 1523 1636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00240 Aip-Chr6 2820780 2829969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00240 788 1639 Glycoside Hydrolase AT1G03310 54.070 0.0 934
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00240 K21989 - gmx:100776693 1252.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00240 06 2820780 2829969 Aip06g00240 06 2820780 2829969 ECH