Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00239 ATGGCGCCCAGTCGCAAGAAGGGCGCCAAGGAAGGCGGCGGCGGCTGCCGCCGCACGTCGGCAGTGGNNNNNNNNNNNNNNNNNNNNNNNNNAGATGAATTGTGGGTAAGTGAGCCGGAGAAGTGGGGTTATTCCTCTGATGGGAAGAAAGTACTTGTTTACTTCTTTGGAACCCAACAAATAGCATTCTGCAATCCTGCTGATGTTGAAGCCTTTACTGAAGAGAAGAAACAGTCTCTTGCCAAACGACAGGGAAGGGGTGCTGATTTTGTGCGTGCAGTAAAGGAGATTATTGCCAGTTATGAAAAGTTAAAGCGAGACATCCAAGTTCAGAAAACTTGCTCCAATGATCAAGTTACTAATGTAGATGTCTCAAAGCCAGCTGACTCGTATGCTAATGTAAAGGTTCAAAGAGATGCTCCTTTGACACATGATTCACAAAATAAATCTTCAAATTTGACTGACAGACAAGAGCTAGTTTGTGCAGCTGAGAATGGTCCAGTAGTTGCAATTAGGGGTGAATCCTGTAATAATGAGGTATCATTGGAAGAACCTACTGATGATGCTGTTGCAACTGCAACTGGGAACTCACCTTTGCCAGTAACTTCCCCATCTCCAGGAAGATGCAAAGACTTGCATCTGGAAGGCCATGTACTACAAAGAAATGAGCCTGTTCGAAGATCTAGAAGCTCATCACGAGTCCACAACAATGTTGTGCCTTGTGATGCTGGAGGTAATGCTGGTGATGTAACTCATATTGTGCCTATAACCAGGAACAAACGAATTAAAAAATCACCTGATCTCTCTGGGTGTGATGATGCTGATTCTTCAGCATATGCCTCCGATGTCAGCATGGAGGACAATGGTTCTGAAAATATTGCTGTTGATTCTGATTCCTTTAGCCCAAATGAGGGAAGTACACTAGATTCGGATTTTAAACTTGGACAGTCTGAGAATAGTGAGTGGCCTGAATTTGAAGTTGAGTTGAAGAAAGGGCTTGATCTAGAAATTAAGGCTGTATTCAATAAGAAGAAAAGAAAACCAAATAGGAAGAGGGCAAATAATGATTCTGCCACGCCATCCATCAGGAAAGAGGAGCCTGAATCTCAAAATGCCAATCACAGTTTGCAGAATATGTGTGGAAATTCAATTGAGAAATGCTTAAATCAAGACGGAGATGAACACTTGCCCCTATCAAAACGAGCCAGAGTTAGAATGGGCAAATCATCCAGTGAGGCAGAGCTCAATAGCACTGTGCAAGCTCAAGAGAAAAGCTATAAGGAAGACATTGTTAACTCACCAAAGCAGATAATCACATCCTCAAATTGTGAAAATGGTAGCCTGGCTGGTGAGGATCCGGTAGCATTAAATGGAACAGTGGTTCTCGTTTCTTCTTCAAATTTGTTAGAGCCACATTTTGAAAGTGGATCTCAGATTTGTAAAACAAAAAAAGAGAAAATGTTTGGCTGCACAATGGATGTTGAAGCTGCTTTACCTCCATCTAAGCGCCTCCATCGTGCTTTAGAAGCTATGTCTGCTAATGCTGCTGTAGAAGATCAAGCTTGCAACGAGCCATTGTCATCCTTATTGACATCGAGTGGAACTTCCACAAAGAGATGCCCTTGCATGACCGCAAATTGCAGTAAAGGAGGTACTGATTTAGAAACGCAAGGCTTGGAATCGTGTGTCATTGGTTGTTCTCACATCAGTGTATCTAGTATCACCACCTGTTCAAATGCAATGATTTCAACAGAGAATAAGTCATCTTCTGAAGTGGATAAGCAGTTGAGCAAGTATCAATGCCATGAAGCTTGCAAAGATGTTGTCCCAGATGGTGTGGATCAAGTTGGTGAAAATCTTGGTGATTCTGTGGTCGATCAGGGTGCTAAAACAGATTCACAAATTCAGTTACATGGAAACATGTCTCCCAATCTTGATGTAAAATGTTGTGAAGTTAGAAGCAATCAAGATTCTCCAGGTCCATCATTGCCACCAAAAGATGAAGACAATATGAAAACTGTGAATCATTCAAATCCATCTGATACATTAGAACTTAATGGAATAAGTGTTGATCCTGTGGCAGGTCCCAATGAAAGTGGTAAAGTGATACCTCAAAGTAGCATTAATGTGGGTGAGAATCGGATTGTTTGTGAGGATACACAGTGCTCAAAGCAAGCCGTTGATGAAGGCAGCAGAATTAAAAACATGCATGAGGCTGTGAGAGGGGTAGAAATCAAGGGACAAGAGGAGTATATGAATTTGACCTCGATATCCAATGGTTGTTTGGGTGAAAATGGTACTTTGTGCATTCAGTCAAGCCCGTCCTTGACTGGTGGTGGAGGCTGCGTTCCTCAAGGATCACCTCCAAATACATCAGTTTGCAATGTTTCTACATCGGACAGTAGTAATATTCTACAAAATGGAAGTTGTAGCCCTGACGTACACCAGAAGAACACTTCATCTGGTCCCATTGATGGATGGAAAGATGGGTCTGTAGCAAATCAACAATCAAGATTGACAGGCAAGTCAACTGATGCAGGGAATGCTGCTTTGTTGTACTTTGAAGCAATGCTTGGAACATTGACAAGGACAAAGGAAAGTATTGGGCGGGCAACCCGAATAGCTATGGACTGTGCAAAGTTTGGCATTGCTGCTAAGGTGATGGAAATTCTTGTCCGAAGTCTGGAAACCGAGTCAAGCCTGCATCGGAAGGTGGACCTATTTTTTCTTGTTGATTCTATTGCTCAAAGTTCTCGTGGTTTGAAAGGTGATGGTGGAGCATATCCATCCGCTATGCAAGCTGTCCTCTCACGCCTATTGTCTGCTGCTGCTCCTCCTGGACATACTTCGCAAGAGAATCGCAGGCAGTGTCTTAAGGTTTTAAGGCTGTGGTTGGAGAGAAGAATCCTTCCACAGAGAGGCCTTTAG 2928 0.4269 MAPSRKKGAKEGGGGCRRTSAVXXXXXXXXXDELWVSEPEKWGYSSDGKKVLVYFFGTQQIAFCNPADVEAFTEEKKQSLAKRQGRGADFVRAVKEIIASYEKLKRDIQVQKTCSNDQVTNVDVSKPADSYANVKVQRDAPLTHDSQNKSSNLTDRQELVCAAENGPVVAIRGESCNNEVSLEEPTDDAVATATGNSPLPVTSPSPGRCKDLHLEGHVLQRNEPVRRSRSSSRVHNNVVPCDAGGNAGDVTHIVPITRNKRIKKSPDLSGCDDADSSAYASDVSMEDNGSENIAVDSDSFSPNEGSTLDSDFKLGQSENSEWPEFEVELKKGLDLEIKAVFNKKKRKPNRKRANNDSATPSIRKEEPESQNANHSLQNMCGNSIEKCLNQDGDEHLPLSKRARVRMGKSSSEAELNSTVQAQEKSYKEDIVNSPKQIITSSNCENGSLAGEDPVALNGTVVLVSSSNLLEPHFESGSQICKTKKEKMFGCTMDVEAALPPSKRLHRALEAMSANAAVEDQACNEPLSSLLTSSGTSTKRCPCMTANCSKGGTDLETQGLESCVIGCSHISVSSITTCSNAMISTENKSSSEVDKQLSKYQCHEACKDVVPDGVDQVGENLGDSVVDQGAKTDSQIQLHGNMSPNLDVKCCEVRSNQDSPGPSLPPKDEDNMKTVNHSNPSDTLELNGISVDPVAGPNESGKVIPQSSINVGENRIVCEDTQCSKQAVDEGSRIKNMHEAVRGVEIKGQEEYMNLTSISNGCLGENGTLCIQSSPSLTGGGGCVPQGSPPNTSVCNVSTSDSSNILQNGSCSPDVHQKNTSSGPIDGWKDGSVANQQSRLTGKSTDAGNAALLYFEAMLGTLTRTKESIGRATRIAMDCAKFGIAAKVMEILVRSLETESSLHRKVDLFFLVDSIAQSSRGLKGDGGAYPSAMQAVLSRLLSAAAPPGHTSQENRRQCLKVLRLWLERRILPQRGL 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00239 975 PANTHER PWWP DOMAIN PROTEIN 1 972 - -
Aip06g00239 975 MobiDBLite consensus disorder prediction 1 20 - -
Aip06g00239 975 MobiDBLite consensus disorder prediction 140 156 - -
Aip06g00239 975 SMART 558neu5 853 972 IPR006569 -
Aip06g00239 975 MobiDBLite consensus disorder prediction 651 704 - -
Aip06g00239 975 MobiDBLite consensus disorder prediction 345 376 - -
Aip06g00239 975 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 972 - -
Aip06g00239 975 MobiDBLite consensus disorder prediction 779 840 - -
Aip06g00239 975 ProSiteProfiles CID domain profile. 846 975 IPR006569 -
Aip06g00239 975 Pfam CID domain 854 972 IPR006569 -
Aip06g00239 975 MobiDBLite consensus disorder prediction 130 156 - -
Aip06g00239 975 MobiDBLite consensus disorder prediction 181 208 - -
Aip06g00239 975 Gene3D - 35 112 - -
Aip06g00239 975 MobiDBLite consensus disorder prediction 264 315 - -
Aip06g00239 975 MobiDBLite consensus disorder prediction 224 250 - -
Aip06g00239 975 MobiDBLite consensus disorder prediction 281 315 - -
Aip06g00239 975 Gene3D - 852 975 IPR008942 -
Aip06g00239 975 SUPERFAMILY Tudor/PWWP/MBT 45 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00239 Aip-Chr6 2804894 2811171 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00239 - - ahf:112805343 1825.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00239 06 2804894 2811171 Aip02g02786 02 103861618 103874263 PCT