Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00230 ATGCTTCTTCTTCCACCGCCATTCCTGTTCCTCATCTTCCTCATTCTCCGAACAGTAACACCACTACTCCTCTCCCCAATCTCAAAAGACCCCACCACCCAACTCTACACCCTCTCCGTCTACGTTCAAACCCCACTCCAACCCACCACCCTCCACCTCCACCTTGGCTCCTCCCTCACCTGGCTCCTCTGCAACAACTACAACCACCGCATTCCCTGCAACTCCTCTCTCTGTGCCACCTTCAACTCCGGCGGCGCCTGCTCCAACAACACCTGCTCCTTCTTCCCTGAAAACCCCATCACCAGAAAGACTCTCCTCTCCACCGCCAACCTCGACACCCTCGCTTTTCCCACCTCGGACGGGTCAACTCAGGGTCCACTCGTCCAAATCAAAGACTTCGTCTTCTCCTGCTCCACGGCCCAATTACTCCAAGGCCTGGCCCAAAACGCCACTGGTCTAGCCGCTTTGGGCCGAAACAACCTCTCTCTCCCGGCCCAAATAAGCGCCTCTTTGTCCACCACTCGTTGCTTCGCTCTCTGCTTACCCGCTTCAACCCAGAGTCCCGGCGCGGCTATCTTCGCTTCGACCGGACCGTACATTTTTAATTCTAAAATTGACCTCTCCAAATCTCTTGTTTACACTCCACTCATTGTGAACCCCGTTGCGGACACTGTTATCTCTTACAACGGACAACCGTCCGATGAGTATTTCGTTAACGTGACTTCAATTCGGATCAACGGTAAGGATGTTCCCATCAACGCGTCGATCCTGGCCATTGATCAGGACGGGTTAGGTGGGACCAAGATAAGCACGTCAGAGCCGTACACCGTAATGGAAAGTTCTGTATTCAAACGGTTCGTAGAGCTGTTTGTGAATGAGTCATTGGCTTTTAACTTGACGGCGACGGAAGCCGTTGAGCCGTTCGGGGTGTGTTACCGTGAGGGGGACCTCAGTGAGACGCGCGTTGGACCCGCGGTGCCGACCGTGGATTTGGTGATGCACAGCGATGACGTGTTTTGGAGAATATTCGGGGGGAATTCGATGGTGAGGATTGAAAAGGAAGGGGTGGGTATGGGTTTGTGGTGTTTGGGTTTTGTTGATGGTGGGGCGCATAGGAGGACCAGCGTTGTTATTGGAGGGCATCAGTTGGAGGATAATCTCGTGCAGTTTGATCTTGATTCCAATAGATTTGGGTTCAGCTCATCGCTGTTGCTTCAAGCCACAACTTGTTCTAATCTTAATATCTCTAATTTTGTCAACAATAGAATATAG 1272 0.5212 MLLLPPPFLFLIFLILRTVTPLLLSPISKDPTTQLYTLSVYVQTPLQPTTLHLHLGSSLTWLLCNNYNHRIPCNSSLCATFNSGGACSNNTCSFFPENPITRKTLLSTANLDTLAFPTSDGSTQGPLVQIKDFVFSCSTAQLLQGLAQNATGLAALGRNNLSLPAQISASLSTTRCFALCLPASTQSPGAAIFASTGPYIFNSKIDLSKSLVYTPLIVNPVADTVISYNGQPSDEYFVNVTSIRINGKDVPINASILAIDQDGLGGTKISTSEPYTVMESSVFKRFVELFVNESLAFNLTATEAVEPFGVCYREGDLSETRVGPAVPTVDLVMHSDDVFWRIFGGNSMVRIEKEGVGMGLWCLGFVDGGAHRRTSVVIGGHQLEDNLVQFDLDSNRFGFSSSLLLQATTCSNLNISNFVNNRI 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00230 423 Gene3D Acid Proteases 17 194 IPR021109 -
Aip06g00230 423 Pfam Xylanase inhibitor C-terminal 235 400 IPR032799 -
Aip06g00230 423 Gene3D Acid Proteases 197 417 IPR021109 -
Aip06g00230 423 PANTHER OS05G0403000 PROTEIN 10 414 - -
Aip06g00230 423 Pfam Xylanase inhibitor N-terminal 36 193 IPR032861 -
Aip06g00230 423 PANTHER ASPARTYL PROTEASE-RELATED 10 414 IPR001461 GO:0004190|GO:0006508
Aip06g00230 423 ProSiteProfiles Peptidase family A1 domain profile. 36 400 IPR033121 -
Aip06g00230 423 SUPERFAMILY Acid proteases 29 409 IPR021109 -
Aip06g00230 423 CDD xylanase_inhibitor_I_like 41 403 IPR033868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00230 Aip-Chr6 2447962 2449429 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00230 - - pvu:PHAVU_001G149500g 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00230 06 2447962 2449429 Aip06g00230 06 2447962 2449429 ECH
Aip06g00230 06 2447962 2449429 Aip02g02803 02 104018976 104020648 PCT