Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00225 ATGAAGCTCGTTAGGTTTCTCATGAAGTTGAACAACGAAACCGTTTCAATCGAGCTCAAGAACGGTACTATTGTCCACGGCACTATCACAGGTGTTGATATCAGTATGAATACACATTTGAAAACCGTTAAACTAACCCTGAAAGGGAAAAACCCAGTGACTCTGGATCATCTTAGTGTGAGAGGCAACAACATTCGTTATTACATCCTTCCAGACAGCTTGAATCTCGAGACTTTACTAGTTGAAGAGACTCCAAGAGTCAAGCCCAAGAAGCCAACTGCTGGGAAGCCGTTGGGGAGAGGAAGGGGAAGAGGACGTGGGCGTGGACGTGGTCGTGGCCGTTAA 345 0.4638 MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00225 114 MobiDBLite consensus disorder prediction 82 114 - -
Aip06g00225 114 Gene3D - 50 82 - -
Aip06g00225 114 Gene3D - 1 49 - -
Aip06g00225 114 SMART Sm3 5 70 IPR001163 -
Aip06g00225 114 SUPERFAMILY Sm-like ribonucleoproteins 4 113 IPR010920 -
Aip06g00225 114 Pfam LSM domain 5 69 IPR001163 -
Aip06g00225 114 MobiDBLite consensus disorder prediction 93 114 - -
Aip06g00225 114 CDD Sm_D1 2 93 IPR034102 GO:0000387
Aip06g00225 114 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 110 IPR027141 GO:0006396
Aip06g00225 114 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00225 Aip-Chr6 2389255 2391432 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00225 K11087 - rcu:8272063 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00225 06 2389255 2391432 Aip06g00225 06 2389255 2391432 ECH