Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00212 ATGGAGCTAAGCAAAGTAACGCTAGAGATCTTCTCCAAACTAGAGCAGCAATGGCTCTCTCACTACGAAGCCAACGGAAAAACCCGCATTCTCAGCATCGATGGCGGAGGCAATACCGCCACTGTCGCTGGCGCTGCTCTTATCCATCTCGAGGACCAGATCCGCGCTCACACCTCCGATCCTCACGCTCAAATCGTCGATTTCTTTGACATCATTGCCGGTACCGGCATTGGTGCCATCCTTGCTGCTATGATCACTGCCGACGACGGCTTTGGTAGGCCCCTCTACACAGCTAGAGACGCCGTCGGTCTCCTTGCCGACAGAAATCACGAGCTATACAAACTCAAACACGACGGAATCTTCCGCCGGCGCAAGAGATTCTCTTCCAAGAACATGGACAATGTGCTTAAGCAAATTTTCAGTAGAAAAGAGGAAGAAAAGTTGCTTACCTTGAAGGACACGTGCAAGCCGTTGCTCATCCCTTGCTTTGACCTCAAGAGTTCGGCGCCGTTCGTGTTCTCCCGCGCCGACGCGTCTGAGTCGCCGAGTTTCGACTTCGAACTCTGGAAAGTGTGCCGCGCCACCTCTGCGACTCCGAACCTCTTCAAGCCATTCCACTTCGCCTCGGTAGACGGTAAGACCTCCTGCTCCGCCATCGACGGCGGAATCGTCATGAACAACCCTGCGGCATTAGCCGTCACGCACGTCCTCCACAACAAGCGCGACTTCTCGTCGGTGAACAGCGTTGAGGACCTACTCGTACTGTCAATCGGAAACGGAGCTCAAGCGAAGAAGGTTCGAGACGTCGGCGAGTGCTCGACGTCGTCGGTGGTCGACATTGCCATCGGCGGCGTTTCCGAGACCGTTGACCAGATGCTTGGGAACGCCTTCTGTTGGAACCGCACGGACTACGTGAGAATCCAGGCGTTCGGTATGGAAGAGGAGGTGCTTAAGGAGAGGGTGCTTGAGTCGTTACCGTTTGGTGGGAAGCGTTTATTGCAGGAAACTAACGGTAACAGAATCGAAAGCTTTGTGCAGCGCCTTGTTGCCATCGGAAAAGCTAGCCTCCCACCCAGTCCCTGTAAGGTTCCGCTGTGA 1098 0.5474 MELSKVTLEIFSKLEQQWLSHYEANGKTRILSIDGGGNTATVAGAALIHLEDQIRAHTSDPHAQIVDFFDIIAGTGIGAILAAMITADDGFGRPLYTARDAVGLLADRNHELYKLKHDGIFRRRKRFSSKNMDNVLKQIFSRKEEEKLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFDFELWKVCRATSATPNLFKPFHFASVDGKTSCSAIDGGIVMNNPAALAVTHVLHNKRDFSSVNSVEDLLVLSIGNGAQAKKVRDVGECSTSSVVDIAIGGVSETVDQMLGNAFCWNRTDYVRIQAFGMEEEVLKERVLESLPFGGKRLLQETNGNRIESFVQRLVAIGKASLPPSPCKVPL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00212 365 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Aip06g00212 365 SUPERFAMILY FabD/lysophospholipase-like 26 314 IPR016035 -
Aip06g00212 365 CDD Pat17_PNPLA8_PNPLA9_like 30 309 - -
Aip06g00212 365 Gene3D Cytosolic phospholipase A2 catalytic domain 17 355 - -
Aip06g00212 365 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Aip06g00212 365 PANTHER PATATIN-LIKE PROTEIN 6 2 364 - -
Aip06g00212 365 PANTHER PATATIN 2 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00212 Aip-Chr6 2209504 2211379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00212 1 362 Acyl Lipid Metabolism Gene Families AT3G63200 69.624 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00212 - - gmx:100806989 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00212 06 2209504 2211379 Aip06g00212 06 2209504 2211379 ECH
Aip06g00212 06 2209504 2211379 Aip02g00752 02 11837564 11839297 PCT