Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00211 ATGACACAACACCACCATCTTCATCTTCATCAACACAATAACAAGAGCAACAACAACAACAAGGGACGACAACGACCCAATCTCATCACCATGGACATTGACAACAACAAAACTAGAGATTCTAGAAGACCACTACCTTTCACCGCTAATGCCTTCCCTAAACGCCGTCACTCCACTATTCCCTTCCGTCGCTCTTCTCAGGAGGGAGAGGTGGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTCCAAGAGAAGGAGAGGCTCTTACGAAGAAGCTGAGAGTGTTGCCAATGAACACCAAGACGGTGACGTTTTTGACGCCGGTGTTTCGCGGGAGCTTTCCTCAAATACGGCCTCGTCCTCTGCACCGGATTCAAACCATCGTCGGACGTTCAGCTCAACCCCGCTGCCTCTTCTTCCTCTTCGTCCTCCCTCCATCAGTCGCGAAATCATCGGTGTTACGGTTCCCCGCAAGGCTCGCTCAGCTGGTGCAAAAAGGACGCATGCGAGTCCGGCGTTTGGAACATCGGAGGAGCAAAGTTCACGGAGTGCTGTAGCGGCATCATCACCTTCCTTTTCCAGTGTTTCTCTGAAGAAGATGAAATTGATAGGATCGAAGACTCGGCTTTCGGAGGAGTTGAAATTGTGTTCGTCAACTGACGAAGACATCGATATTGAAATAGCTGAGCTTCTCTTCGATTTGAAGACCTCCAATAGCAGCTATTATTCTTCTTCGCAGAAGCTGGAACCGAGTACTAGTCCATCGACTCTTCCTTCTGATGATGCTGACAACAAGAAAGTGGAAGATTACAGTTCTTCGGCTCTAGCTGCCCAATTTGTAAAAGTGGAGAAGCTTTCTGATGATGCTGACAATGGTCCTTGTCATGAAATTGGATCATCAGAGGCTGTAAAATTGGAAAATGATTTGAATTCAGGTGCTGGATATGACATTTTCCCAGATGGAAGATCAGAGTTCTTCACAAGTGAAACTCCTTCCAAATTGGATGTTAACAAACATGAGGATTTTGCTTCCATTAGAGATGTGCCTGCTATTTCCGAGGACAAAGGCCAACGAGTGGACAAGTTTGAGATTGATCTTATGGCTCCTCCTCCTATGATGACATCCCCAGAAAGGGATAATTTGTTAATGTGTGAAGATAGTGTCAAACTTAAAGATAATGCAGAAAGACTCGCTAAGAAAGAGAAAATGAAGGAAGAAGACAAAGACGTGGCGATGGATGAGTTAAAACTTGATTTGAAGCCAAGCAAACATATCGAGGAGCAGGTTAGAAATATGGAGCAACCCATTAAATTCACAAACCTCAAAGTGGAGAAAACTGGTGAATCTAGTTCTGTGTCTTTGTCGACAGCGGTATCAGAAGGGCCAGGCAATCTCCTGGCTGTCAGATACATGGCACCCATGCAGAATGTAGTGAAGACTGAAAAAACCACAGTTTCCGCAATGGCCCCGCAGGAGCATATGAGTTTTGTTCTCTCTGAACCTCGAGCAAAGAGATGTGCAACCCATCATTACATTGCTCGCAACGTCTTCTTCCACCAACAACGTACAAAGATGAACCCCCTTTTGCCATCAGCTGTTGCCTCTGGTCCTCCTCCGTGCAACACAAAGTACAATGATATCAATTGTATGCGCTCTGCAGGGAGTATGCTTGTTGGGAAGAAGTCTCAAAAACACTCAAGTTTGAACCAAAGTGTTGCACAAGAGAAGGGATGCGCTGCTACTAACGATTATAGTCTTGCTTCAGTTAGAAATTCTGCTCTTGCCAACTCAATAGATTCAACACAAATGAAGCAGCTTGTGCTTCAGCAAGGTTCACAACCAGGGTCAACTGGTAATCTAGTGCATGGCCCTGCTTTCCTATTTCCTACTGGCCAGCATCAAGCATCAAAGACAACCACCGCTATTCAGGCCGCAGGAGTTAACTCCACCAGCAGTGCTGCCTTATCTAATAAATCCCATAGTTCACCCGTGGGAGCTCTTGGTACCTCCTCTACATTGGCAGGAGTTGCTGCTGCAACGGGCTTTAGCTCCCCAAATTTGACAGCCAATGACACTCCTTATATGACAATAGTTCCCAATAGTGGGTATCCATTCCCCTTCTCAACTCCTCTTGGAGCATCTGCTGCCATCAAGGGTGCAAGCCCTGCACAACCAACACCTATACTCAATGGGCCTTTGTACACTTCTCAGATGTTCCATCCTCTTCAACATCCTCACTCCCAATCATTGATTCAACCGAGTTATCTCAATGCAAGCAATTCAAATGGTTCATCTTCTCATAAGCAATCACAGGGGACACAAATCAATGATAATAGTGTTTTAACCACACCTATGCAACTACAGCTGTTACAAAAGCAGCACGCTTTGCTGTCTAATCCTCACAAGCATGATGAGATTGGGATGGCTGGAGAGAACAGTCCATCTATTGGTGGAACATCTTACTCCCAAAAGAATGTGTTTGGGCAGAACTTCACCATTCCGGTTCAGCCAGTGAACTTTTCTTTCAGGCCATCTGGAACATCAGATAATATTGTTGGTGGTAACGGTGGAAATTTCAGTGACAAGAAGCAACTGCCACAGGCTCCAAAAGGTGGAGATGATCGTATGCCATCTCAACCTTTTGCCATATCATTTGCAGCATTCAATGGTTCTGCTGTTCCTTCAAATCTGAACTTCTCTTCTCTGGCACAGAACCCAATGATATTTCAGAACCTCCCTGACATTGCATCATGGCAAGGATATCAAGCTGCAAGTGCATCTCACACTATGCAGCAAAACATTTATTCAGTTACTGAAGGGAAGTATGGAGGTAAGTCATCCCACCAAGATGATGAAAAGAAAGCCTCAACTTCTGGTAAGTCATCAACCAATGTGCCAACGACCCTTGTTTTCGATAATTCATCAAAGAATCTCAACTTTGTGCCACCTCCTATGAATGTAAACTGGCCCAGCCATTCCATGACTTCGACTTCAACAACCTCGAGTTCGCCACTTTCTAGTATTGCTTCAAATTCTCATCAACATCCACTACAGCTGTTTCATCTCCAGCAGCAACATGGTATGTTGCAGCAGCTACCTGCCATGCCTACTCAATATAAAGCATCATCAACTAATTCTACCATTGCTACAAAACATGTTAACAGTCCCACAGTTTTCTCGCAAACTCTTAATCAATGCAAAATATCTAACCAAGCTTCTCAGTCAAAGAACACATCTATTGTAACATCTGCTACCCCATCGCTGAATGGTTTTTCTTATGAGCAAGAAAGAGTTTTACAAGGTCACAGCCAAATATCTTTCGTGGGAAGTTACATGCCAGCCCTGCCACCCCAACAAGGGCAACAACTTCTGAGTAACACCCAGCCTTTTGGCACAAATTCAATAGTTGCAGGAACTCCACCTAATGGTGGTGGCAACATGAAGACAAATTCCCAAGGAAGCAAACCTGTTCCATCATTATCAATAAACACTTCACAGAAGCACCAAACTGAGAATTCCTCTGCCGGGAGCAGCCAGAAATCTTCCCCAGTTTGTGGGAGGAATGTGCCATCAATATTAAGTTCATTCCCCAGCCACCTGTCCGAGCTGAATTCTGTCTGGGAATATCAATTTCTTCCTCGTCCCTCAATAGTTGTGACCAATAGAAATCATACGGTTCTTTACTCTGATCTTAGTGCACCTTCACACAAATCTAGATTTGGATTCAAGTTCTTCCTTCAAGGTCCTCCTGCTAAGTTTTGGGGAAAATATGCAAAGAAAAGTGGTGGATTTCGTCCAATATCTGCAGCATCACATCCAGCTCTTGGATTCAAGGAGGGTGGGCCGTACTTCAAATGGCTACAAACTTTGAAGGACGACGTTGAATCAACTGAGGAACATGTTTTTCATCAGGTGGTGGTGACAAACGAGATAAGAAAGAAGATAAATGTGGTGAAAAGGATGTTAGGGTCAATGGAAGATGGAGAAATAAGCATATCAGCTTATGACACAGCATGGGTTGGTCTGGTGAGAGATGTTAATGGCGGAGGAGGACCTCAGTTCCCATCTTGTCTTGAATGGATAGCCAGTAATCAGCTTTCTGATGGTTCTTGGGGTGATGCTCAACTTTTCAATGCCCATGATCGCATTCTTAACACCTTGGCTTGTGTTATTGCATTGAGAGCATGGAATTTGCACCCCCAAAAATCTCACATAGGGCTGAAGTTTGTGAAGGAAAATCTAAGCAAGCTTGAGGATGAGAATGTTGAACATATGCCAATCGGGTTTGAAGTAGCTTTCCCTTCTCTTCTCGACTTGGCTCGAAGTATGAATATTGAAGTGCCACATGATTCTCCTATCTTGAAACAAATCTTTGCCATGAGAGACCTAAAACTCACGAAAATACCAATGGAGGTGCTTCATAAGGTTCCCACAACACTGCTTCATAGTTTGGAGGGAATGGCAAACTTGGATTGGAAAAGACTCTTGAAATTGCAGTCACAAGATGGTTCATTCTTGTTCTCTCCATCATCCACAGCCTACGCTTTCATGCAAACCAATGATGAAAATGCTCTCAAATATTTGGAGAAAACTGTGAAAAGGTTTAACGGGGGAGTTCCAAACGTTTATCCCGTGGATTTATTTGAGCACATTTGGGCTGTTGATCGATTAGAACGTTTAGGTATTTCAAGATATTTTCAGACAGAAATTAAAGAATGTATGGAATATGTTTCAAGATATTGGACCGAGAAGGGTATTTGTTGGGCAAGAAATTCGGAAGTTCAAGATATTGACGATACTGCAATGGCATTTAGATTGCTAAGGTTACATGGCCACCAAGTTTCACCCGATGCATTCAAGCATTTTGAGAAAAGTGGCGACTTCTTCTGCTTTGCTGGACAATCAAATCAAGCTATAACTGGGATATACAATCTTCATAGAGCTTCTCAAGTGTTGTTTCCTGGAGAGAAGATTCTTGAGAATGCCAAACTTTTTTCGTCCAAATTTTTAACTGAGAAACGGTTGGCTAATGAGATAGTGGATAAATGGATCATAACAAAAGATTTGCCTGGTGAGGTGAGCTATGCTTTGGATGTGCCTTGGTATGCTAGCTTACCCCTGTTGGAGACAAGATTTTACATAGAACAATATGGCGGTGAAAATGATATTTGGATTGGCAAGTCACTTTACAGGATGCCATACGTGAATAATGATATTTATCTGGAGCTTGCTAAATTAGATTACAACAACTGCCAAGATATGCTCTCTGCAGAATTGGAGAAAATCCAAAGGTGGTACTTGGAAACAGGATTAGAGGAATTTGGAGTGAGCAAAGAAAGTGTTCTGCAAAGTTATTTTGTGGCAGCAGCCAGCGTGTTCGAGCCTGAGAGGTCCCTAGAGCGACTCTCATGGGCTAAAACCACGACTTTGATCGAGACATTGAAGTCCTATACAGGGGATGAAGAAGCAAGGAGGGCTTTTGTAGAACAATTCAATAACAGCATTAACAGACAAGATTTTCCAAAAAAGTGGCTAGATAAGAACAACAAAACAGAAAAACTTGTTTGGATTTTGCTGATAACTATTGAGTATCTTGGATTGGAGTTTTTTCGAACTCGTGGGCAGGAAATTTCTCATTATTTGAATCAAATTTGGGAAAGTTGGTTGTTTAGTTGGCAAAAAGAAGGAAGCAGTTCCACAAGGGAAGCGGAGCTGATTTTGAAAACCATACATATAATGAGTGGCTGTTGGTCACAAGAGCTACAGCTAAATCTTCAGTATCAGAAATTGCTGCAAGAGGCAAATGTGAATGGCAGCTGCAACATGAGTGGAACCAGAGTCACCACACCACAAATAGAATCAGAAATGCAAGAGCTTTTGCAAACAGTGCTCCAAAATTCCCCAGATGGCATTCAAAATCAACCCCGTGTTAAGAATTCATTTCTTCTGGTGGCCAAGAGTTTCTACTATGCTGCCTATTTTGACGATCAGACAATTATATCACACATTGACAAAGTTCTATTTCAAAAAGTGATGTAA 6240 0.4154 MTQHHHLHLHQHNNKSNNNNKGRQRPNLITMDIDNNKTRDSRRPLPFTANAFPKRRHSTIPFRRSSQEGEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKRRRGSYEEAESVANEHQDGDVFDAGVSRELSSNTASSSAPDSNHRRTFSSTPLPLLPLRPPSISREIIGVTVPRKARSAGAKRTHASPAFGTSEEQSSRSAVAASSPSFSSVSLKKMKLIGSKTRLSEELKLCSSTDEDIDIEIAELLFDLKTSNSSYYSSSQKLEPSTSPSTLPSDDADNKKVEDYSSSALAAQFVKVEKLSDDADNGPCHEIGSSEAVKLENDLNSGAGYDIFPDGRSEFFTSETPSKLDVNKHEDFASIRDVPAISEDKGQRVDKFEIDLMAPPPMMTSPERDNLLMCEDSVKLKDNAERLAKKEKMKEEDKDVAMDELKLDLKPSKHIEEQVRNMEQPIKFTNLKVEKTGESSSVSLSTAVSEGPGNLLAVRYMAPMQNVVKTEKTTVSAMAPQEHMSFVLSEPRAKRCATHHYIARNVFFHQQRTKMNPLLPSAVASGPPPCNTKYNDINCMRSAGSMLVGKKSQKHSSLNQSVAQEKGCAATNDYSLASVRNSALANSIDSTQMKQLVLQQGSQPGSTGNLVHGPAFLFPTGQHQASKTTTAIQAAGVNSTSSAALSNKSHSSPVGALGTSSTLAGVAAATGFSSPNLTANDTPYMTIVPNSGYPFPFSTPLGASAAIKGASPAQPTPILNGPLYTSQMFHPLQHPHSQSLIQPSYLNASNSNGSSSHKQSQGTQINDNSVLTTPMQLQLLQKQHALLSNPHKHDEIGMAGENSPSIGGTSYSQKNVFGQNFTIPVQPVNFSFRPSGTSDNIVGGNGGNFSDKKQLPQAPKGGDDRMPSQPFAISFAAFNGSAVPSNLNFSSLAQNPMIFQNLPDIASWQGYQAASASHTMQQNIYSVTEGKYGGKSSHQDDEKKASTSGKSSTNVPTTLVFDNSSKNLNFVPPPMNVNWPSHSMTSTSTTSSSPLSSIASNSHQHPLQLFHLQQQHGMLQQLPAMPTQYKASSTNSTIATKHVNSPTVFSQTLNQCKISNQASQSKNTSIVTSATPSLNGFSYEQERVLQGHSQISFVGSYMPALPPQQGQQLLSNTQPFGTNSIVAGTPPNGGGNMKTNSQGSKPVPSLSINTSQKHQTENSSAGSSQKSSPVCGRNVPSILSSFPSHLSELNSVWEYQFLPRPSIVVTNRNHTVLYSDLSAPSHKSRFGFKFFLQGPPAKFWGKYAKKSGGFRPISAASHPALGFKEGGPYFKWLQTLKDDVESTEEHVFHQVVVTNEIRKKINVVKRMLGSMEDGEISISAYDTAWVGLVRDVNGGGGPQFPSCLEWIASNQLSDGSWGDAQLFNAHDRILNTLACVIALRAWNLHPQKSHIGLKFVKENLSKLEDENVEHMPIGFEVAFPSLLDLARSMNIEVPHDSPILKQIFAMRDLKLTKIPMEVLHKVPTTLLHSLEGMANLDWKRLLKLQSQDGSFLFSPSSTAYAFMQTNDENALKYLEKTVKRFNGGVPNVYPVDLFEHIWAVDRLERLGISRYFQTEIKECMEYVSRYWTEKGICWARNSEVQDIDDTAMAFRLLRLHGHQVSPDAFKHFEKSGDFFCFAGQSNQAITGIYNLHRASQVLFPGEKILENAKLFSSKFLTEKRLANEIVDKWIITKDLPGEVSYALDVPWYASLPLLETRFYIEQYGGENDIWIGKSLYRMPYVNNDIYLELAKLDYNNCQDMLSAELEKIQRWYLETGLEEFGVSKESVLQSYFVAAASVFEPERSLERLSWAKTTTLIETLKSYTGDEEARRAFVEQFNNSINRQDFPKKWLDKNNKTEKLVWILLITIEYLGLEFFRTRGQEISHYLNQIWESWLFSWQKEGSSSTREAELILKTIHIMSGCWSQELQLNLQYQKLLQEANVNGSCNMSGTRVTTPQIESEMQELLQTVLQNSPDGIQNQPRVKNSFLLVAKSFYYAAYFDDQTIISHIDKVLFQKVM 2079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00211 2079 MobiDBLite consensus disorder prediction 911 929 - -
Aip06g00211 2079 MobiDBLite consensus disorder prediction 151 206 - -
Aip06g00211 2079 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 1368 2076 - -
Aip06g00211 2079 MobiDBLite consensus disorder prediction 1007 1035 - -
Aip06g00211 2079 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 1402 1584 IPR008930 -
Aip06g00211 2079 MobiDBLite consensus disorder prediction 806 849 - -
Aip06g00211 2079 MobiDBLite consensus disorder prediction 310 327 - -
Aip06g00211 2079 MobiDBLite consensus disorder prediction 224 252 - -
Aip06g00211 2079 Pfam Terpene synthase, N-terminal domain 1558 1764 IPR001906 GO:0010333|GO:0016829
Aip06g00211 2079 MobiDBLite consensus disorder prediction 1058 1077 - -
Aip06g00211 2079 SFLD Terpene Cyclase Like 1 N-term 1372 1798 - -
Aip06g00211 2079 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 1569 1789 IPR008930 -
Aip06g00211 2079 Gene3D - 1385 1816 IPR036965 GO:0010333|GO:0016829
Aip06g00211 2079 Gene3D Farnesyl Diphosphate Synthase 1818 2079 IPR008949 -
Aip06g00211 2079 SUPERFAMILY Terpenoid synthases 1803 1963 IPR008949 -
Aip06g00211 2079 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 1368 2076 - -
Aip06g00211 2079 MobiDBLite consensus disorder prediction 310 335 - -
Aip06g00211 2079 MobiDBLite consensus disorder prediction 911 945 - -
Aip06g00211 2079 Pfam Terpene synthase family, metal binding domain 1808 1962 IPR005630 GO:0000287|GO:0010333|GO:0016829
Aip06g00211 2079 Gene3D - 1401 1613 - -
Aip06g00211 2079 MobiDBLite consensus disorder prediction 177 200 - -
Aip06g00211 2079 Coils Coil 71 72 - -
Aip06g00211 2079 MobiDBLite consensus disorder prediction 13 29 - -
Aip06g00211 2079 MobiDBLite consensus disorder prediction 151 173 - -
Aip06g00211 2079 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 1372 1798 - -
Aip06g00211 2079 MobiDBLite consensus disorder prediction 1183 1253 - -
Aip06g00211 2079 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00211 Aip-Chr6 2179264 2192971 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00211 K04120 - adu:107492992 1953.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00211 06 2179264 2192971 Aip06g00211 06 2179264 2192971 ECH
Aip06g00211 06 2179264 2192971 Aip02g00760 02 11910012 11914938 PCT