Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00208 ATGGAAGATGGAGAAATATCAGTGTCTGCCTATGACACAGCATGGGTTGCTCTTGTTGAAGATGTTAAAGGAAGTGGTTCTCCTCAATTTCCAAAAAGCCTTGAATGGATTTCAAACAACCAACTCCCTGATGGTTCTTGGGGTGACAGTCAAGTATTCTCAGCCCATGATCGAATCCTCAACACCTTAGCTTGTGTGGTTGCATTAAAAACATGGAATATGCATCCTGAACAATGTGACAAAGGAATGAAATTCTTCAAAGAGAACCTTGAGAAGCTTCAGGATGAGAATGATGAACACATGCCAATTGGGTTTGAAGTAGCTTTCCCTTCACTTATGGACATAGCGCGTAAGCTGAACATTGAAGTGCCTGAGGATTCACCTATATTAAAAGAAATTTATGCCAAGAGAAACTTAAAACTAACCAGAATACCAAGAGAAGTGATGCATAAAGTGCCCACAACTCTTTTACATAGCTTGGAAGGGATGTCAGGCTTGAATTGGAAACAGCTTCTAAAACTTCAATCTCAAGATGGCTCATTCTTGTTCTCTCCATCTTCCACTGCCTTTGCTCTCATGCAAACCAAAGATCACAATTGCCTCTCTTATTTGAATAAAGCCATTAATAAGTTCAACGGTGGAGTTCCAAATGTGTATCCAGTGGATTTGTTTGAACATCTTTGGACGGTAGATCGACTGCAGCGCCTCGGGATATCGCGATATTTTGGCCAACATATCAAAGACTGTTTGAGCTATGTTTTCAATTATTGGACTGAGAAAGGTATTTGTTGGGCAAAAAATTCGAGTGTTCAAGATATTGATGACACAGCAATGGGTTTCAGATTACTAAGACTACATGGGTATAAAATGTCAGCCAATGTGTTTAAGAACTTCCAAAGAAACGGTGAATTTTTCTGCTTTGCTGGGCAATCAACACAAGGGTTGACTGGAATGTTCAATCTATATAGAGCAACACAGTTGATGTTCCCTGGAGAAGAGATTCTTGAGAGTGCAAAGAGTTTCTCCGAAAAGTTTTTGAGGGAAAAACGAGAGTCAAATCAGCTAGTTGATAAATGGATCATAATGAAGAATTTGCCAGAAGAGGTGGCATATGCTTTGGACATCCCATGGTATGCAAGCTTGAATAGAGTGGAGACAAAATTCTACATTGATCAATATGGTGGTGAGAGTGACATTTGGATTGGCAAAACTCTTTACAGGATGCCAATTGTGAACAACAACCACTATTTGGAGCTAGCTAAATTAGATTACAACAACTGCCAAGCTGTCCATCTAACAGAATGGGAAAAAATTCAGAAGTGGTACTCAAATTTGAAATTAGCAGAATTTGGACTGAGCAAAAACTCTCTGCTATTGGCATACTTTTTGGCGGCAGCCAGCATTTATGAACCTGAAAGGTCCCACGAGAGGCTTGCATGGGCCAAGACCACCGCATTGCTTGAAACAATAGCATCCTATGTTACGGACGACGATGCTGATTCAAGAAAAGATTTCGTCACAAAATTCACTCAATGCTTTGACAAATGTGACAATTCTGTTGGATGGAGGTTGAAGAAGAATAGAACAGGACAAGAACTTGCTCAGACTTTAGTTGCGGATATAGATCAAATTTCTTGGGATATATTCGTATCTCATGGTCATGAAATTGGATATGACATGCTTCATGCATGGAAAAAATGGCTTTCAAGTTGGCAAATAGAAGGGAACAATTGCGAAGGAAAAGCAGGGCTATTGGTGCATATAATAAACCTAAGCGGTGGACATTGGATCTCAGAGGAAGAGCTAAGCTTCAATCCACAGTATCAGCATTTGCTCCAATTAACCAACTCAGTGTGTCACAAGCTCTATTCTTTCCAAAAGGACAAGTATACAGATGTGAGGATACAGATATTCTTCCTGGGGCTATGTGGTGCTGACAGGTGTCCACGGCAACGGTGTAACATGAAGCCACCATGTAGCCGAGTAGCTGATGCGCGGGAAGGGAATTGGCTCCGTTTGGATAGAAGTAGCTGCGGCAGGATGTGGAGGATTGGGCCATGGTTGGATGGGCTCCATGTGTGGCCTTGGATATGGGTGGGCCGTGGGGCATCATGTTTGAAAGGGTGGCATGCGTTACAAGCACACTGGAACATTAATTAA 2160 0.4153 MEDGEISVSAYDTAWVALVEDVKGSGSPQFPKSLEWISNNQLPDGSWGDSQVFSAHDRILNTLACVVALKTWNMHPEQCDKGMKFFKENLEKLQDENDEHMPIGFEVAFPSLMDIARKLNIEVPEDSPILKEIYAKRNLKLTRIPREVMHKVPTTLLHSLEGMSGLNWKQLLKLQSQDGSFLFSPSSTAFALMQTKDHNCLSYLNKAINKFNGGVPNVYPVDLFEHLWTVDRLQRLGISRYFGQHIKDCLSYVFNYWTEKGICWAKNSSVQDIDDTAMGFRLLRLHGYKMSANVFKNFQRNGEFFCFAGQSTQGLTGMFNLYRATQLMFPGEEILESAKSFSEKFLREKRESNQLVDKWIIMKNLPEEVAYALDIPWYASLNRVETKFYIDQYGGESDIWIGKTLYRMPIVNNNHYLELAKLDYNNCQAVHLTEWEKIQKWYSNLKLAEFGLSKNSLLLAYFLAAASIYEPERSHERLAWAKTTALLETIASYVTDDDADSRKDFVTKFTQCFDKCDNSVGWRLKKNRTGQELAQTLVADIDQISWDIFVSHGHEIGYDMLHAWKKWLSSWQIEGNNCEGKAGLLVHIINLSGGHWISEEELSFNPQYQHLLQLTNSVCHKLYSFQKDKYTDVRIQIFFLGLCGADRCPRQRCNMKPPCSRVADAREGNWLRLDRSSCGRMWRIGPWLDGLHVWPWIWVGRGASCLKGWHALQAHWNIN 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00208 719 Gene3D Farnesyl Diphosphate Synthase 427 652 IPR008949 -
Aip06g00208 719 Pfam Terpene synthase family, metal binding domain 417 578 IPR005630 GO:0000287|GO:0010333|GO:0016829
Aip06g00208 719 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 9 89 IPR008930 -
Aip06g00208 719 SUPERFAMILY Terpenoid synthases 412 629 IPR008949 -
Aip06g00208 719 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 1 628 - -
Aip06g00208 719 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 178 398 IPR008930 -
Aip06g00208 719 Pfam Terpene synthase, N-terminal domain 167 373 IPR001906 GO:0010333|GO:0016829
Aip06g00208 719 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 1 628 - -
Aip06g00208 719 Gene3D - 2 425 IPR036965 GO:0010333|GO:0016829
Aip06g00208 719 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 1 407 - -
Aip06g00208 719 Gene3D - 10 222 - -
Aip06g00208 719 SFLD Terpene Cyclase Like 1 N-term 1 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00208 Aip-Chr6 2137415 2145845 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00208 K04120 - gmx:100784193 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00208 06 2137415 2145845 Aip06g00208 06 2137415 2145845 ECH