Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00189 ATGGATTTATCGGAGGAACCAGCTGGATTCGCCGGTAAATCCGTAAACGAGAACGATAGTTTCGGTGACGGTTGCGGGAAGAGGAAATTTGTCCTAGCTAGCTTCCTTTCTTGGACTCAGAATAGCATAGCATGCACAATCTCCATGATGAGCAGCATCACCCCATGCGCCAACTTCATCACCGGAAGCGGCAACAACAACGGCGGTGTGACGCCGCCATCAAGCACGTGCTGCGATTCATTGCGCGCTCTGATGAGTTCAAGCATGGATTGTGCTTGCAAGGTTTTATCTGCAAATGCTCCAAATCTCCAACTTCCCATCACACAAGCTGTTGCCATCTCCCTTGCAACCGCATGCAATATTAATGGACTCTCCGCACACTGTAAAGGAGAGGTGGTGGAAGCAGAATCGGCGGCAAAAACACCGTGA 429 0.5035 MDLSEEPAGFAGKSVNENDSFGDGCGKRKFVLASFLSWTQNSIACTISMMSSITPCANFITGSGNNNGGVTPPSSTCCDSLRALMSSSMDCACKVLSANAPNLQLPITQAVAISLATACNINGLSAHCKGEVVEAESAAKTP 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00189 142 SMART aai_6 45 128 IPR016140 -
Aip06g00189 142 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 42 132 IPR043325 -
Aip06g00189 142 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 49 125 IPR036312 -
Aip06g00189 142 CDD AAI_LTSS 53 121 - -
Aip06g00189 142 Pfam Probable lipid transfer 41 126 IPR016140 -
Aip06g00189 142 PANTHER LIPID TRANSFER PROTEIN 42 132 - -
Aip06g00189 142 Gene3D - 43 126 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00189 Aip-Chr6 1944880 1948327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00189 40 129 Lipid Metabolism Gene Families AT2G48140 44.444 1.08e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00189 - - ahf:112696233 209.534