Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00187 ATGAGAGATGAGAACTCCAAGAAAAGCAAGCTTTCATGGCCCAAGACATTGGTCAAGAAGTGGTTCAATATCAAGTGCAAAACTGATAACTTTCAAGCAGATGATGAAGTTGATGATGATGTCCTTTATCAAGGTATTGATGAAGAGAGGAAGAGCAACTATTCAGAGAAGGAGGCATGCACCATCAAAAAAAGCAAAACAGATAAACCAAGCAGAAGATTCTCAGACAGAATTCATGGAGGTAAGAATGACCTTGATCAAGCTCAGATTACAGAAGTGTATAATTATAGAATCTTTGTTGCCACTTGGAATGTAGCAGGGAAGTCACCTCCAAGTTATTTGAACCTTGAAGATTGGCTTCACACCTCTCCACCCGCTGATATCTATGTTCTTGGGTTTCAAGAAATTGTACCTCTTAATGCTGGTAACATTTTGGGAACAGAAGACAATGGCCCTGCAAGGAAATGGCTTGCACTTATTAGGAAGACCCTTAACAGTCTTCCAGGAACAAGTGGTGGATGCCACACTCCATCACCACTCTCTGATCCTATTATAGAGATTGAAGCTGATTTTGAGGGATCAATGAGGCAGAAGACAACCTCTTTCCTCCATAGAAGGTCTTTTCAATCCTTGAGTCATAGTATGAAAATGGATAGTGACATCTCACTGCCACAACCGAGCTTTGATCGGCGTCTCAGCGTCTGTGATAGAATGATATATGCTCACAGGCCTAGTGACTACCGATGGGGTTCTTCAGATGATGAAAATGGAGCTGGGGACTCCCCAGTTACGGCATCCTATTCGCCAGTGCAATATAGCGGTTGTTTCCCTATGGAGGATGTTGAGAAGCAGACAGGGCAACCGAGATATTGTTTGGTTGCTAGTAAGCAAATGGTGGGGATATTTCTAACAGTTTGGGTGAAAAGTGATATCAGAGATTATATTCACAGCTTGAAGGTGTCTTCTGTTGGCAGAGGTTTGATGGGATATCTTGGAAACAAGGGTTCAATATCAATTAGCATGTCTTTGCACCAAACAAGCTTTTGTTTCATCTGTAGTCATTTGACTTCAGGGCAAAAGGATGGTGATGAGCTAAGGAGAAACTTAGATGTAATGGAAATTCTGAGAAAGACAAGGTTTCCCCTTGTCCAAGGCACGAGCGACCAGTATTCGCCTCAGACAATTCTGGAACACGACCGAATAATTTGGCTGGGGGATTTAAATTATCGGGTAGCCCTTTCTTATCGTGCGGCGAAAGCTCTTGTTGAGATGCATAACTGGAAGGACTTGTTAGAGAATGATCAACTGCGAATAGAGCAGAGGCAAGGTCGAGTATTCGAAGGATGGAACGAAGGGAAAATATACTTCCCTCCCACATACAAGTATTCAAACAACTCAGACAGGTATGCAGGAGATGGAAGACATTCAAAACAAAAGAGAACTCCAGCATGGTGTGATAGAATCTTATGGCATGGGAGAGGCCTTCACCAATTATCTTATGTTCGTGGGGAGTCAAGATTCTCTGATCATAGACCTGTGTATAGCATATTCTCAGCAGAAGTTGATCAAAGAAGCTCTAATAATGATTTGAAGAATTGA 1599 0.4221 MRDENSKKSKLSWPKTLVKKWFNIKCKTDNFQADDEVDDDVLYQGIDEERKSNYSEKEACTIKKSKTDKPSRRFSDRIHGGKNDLDQAQITEVYNYRIFVATWNVAGKSPPSYLNLEDWLHTSPPADIYVLGFQEIVPLNAGNILGTEDNGPARKWLALIRKTLNSLPGTSGGCHTPSPLSDPIIEIEADFEGSMRQKTTSFLHRRSFQSLSHSMKMDSDISLPQPSFDRRLSVCDRMIYAHRPSDYRWGSSDDENGAGDSPVTASYSPVQYSGCFPMEDVEKQTGQPRYCLVASKQMVGIFLTVWVKSDIRDYIHSLKVSSVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKDGDELRRNLDVMEILRKTRFPLVQGTSDQYSPQTILEHDRIIWLGDLNYRVALSYRAAKALVEMHNWKDLLENDQLRIEQRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDGRHSKQKRTPAWCDRILWHGRGLHQLSYVRGESRFSDHRPVYSIFSAEVDQRSSNNDLKN 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00187 532 Gene3D Endonuclease/exonuclease/phosphatase 272 532 IPR036691 -
Aip06g00187 532 Gene3D Endonuclease/exonuclease/phosphatase 81 201 IPR036691 -
Aip06g00187 532 SUPERFAMILY DNase I-like 87 521 IPR036691 -
Aip06g00187 532 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 528 IPR045849 GO:0004445|GO:0046855
Aip06g00187 532 Pfam Endonuclease/Exonuclease/phosphatase family 101 510 IPR005135 GO:0003824
Aip06g00187 532 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 528 - -
Aip06g00187 532 SMART i5p_5 230 525 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00187 Aip-Chr6 1937687 1941465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00187 293 490 Acyl Lipid Metabolism Gene Families AT1G05630 31.081 2.52e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00187 - - adu:107493007 1083.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00187 06 1937687 1941465 Aip06g00187 06 1937687 1941465 ECH
Aip06g00187 06 1937687 1941465 Aip02g00793 02 12406793 12410228 PCT