Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00185 ATGTCTTCGTCGTTGATGAAGGATTTTCTCCGCACCACCGGTGGTACGGCAGTCATCGACGGCGGACTTGCGACGGAGCTGGAGCGTAAGGGCGCCGACCTCAACGATCCTCTTTGGAGCGCCAAATGCCTCCTTTCCTCCCCTCACCTCATTCGCGAGGTGCACCTTGATTACCTGGAAAATGGTGCAGATATTATAATCACAGCATCTTATCAGGCCACTATTCAAGGCTTTAAAGCAAAAGGCCTTTCTGACAAAGAAAGTGAAGACTTGATCAGAAAAAGTGTTGAAATTGCTCGGGAGGCCAGAGATGTGTACTATGAAAGATGTGCTGCATGCTCTTCAGGTATCGATGCTGATGGTAGAATCTTCAAGAAACGCCCTATTCTAATCGCAGGTTCAGTGGGGAGCTATGGAGCTTATTTGGCTGATGGGTCAGAGTACAGTGGGGATTATGGTGATGCTATAACCTTGAAATGTCTCAAAGATTTTCATCGGAGAAGAGTTCAAATTTTAGCAGATTCTGGTGCTGATCTCCTCGCATTTGAAACAGTGCCAAATAAGCTTGAAGCTAAGGCTTATTCAGAGCTTCTAAAAGAAGAGGACATAAGTATTCCAGCATGGTTTTGTTTTAACTCCAAGGATGGAATTAATGTTGTTAGTGGTGATTCTTTGGAGGAGTGCATTTCTATTGCTGAATCATGCAGCAAGGTTGTTGCTGTTGGGATCAACTGTACCCCGCCCAGATTTATACAAGACCTGATAGTATCTGTTAAGCAGGTGACTACAAAACCAATTGTTATATATCCAAACAGCGGGGAAACTTACGATGGTATCCAAAAGCAGTGGGTGAAAAATACAGGGGTTACAGATGAAGATTTTGTCTCATATGTGAACAACTGGATTGAGTCAGGGGCTTCCCTTGTGGGTGGTTGTTGCAGAACAACCCCGGCTACTATCAAAGGGATATACACCACACTCTCAGTTAGTCGATCAGTGAATCTTGCAGAGGACTCAGAAGCATCTGATCAGAAAATCTTGCAAGAGAATGTCCGCTGA 1059 0.4466 MSSSLMKDFLRTTGGTAVIDGGLATELERKGADLNDPLWSAKCLLSSPHLIREVHLDYLENGADIIITASYQATIQGFKAKGLSDKESEDLIRKSVEIAREARDVYYERCAACSSGIDADGRIFKKRPILIAGSVGSYGAYLADGSEYSGDYGDAITLKCLKDFHRRRVQILADSGADLLAFETVPNKLEAKAYSELLKEEDISIPAWFCFNSKDGINVVSGDSLEECISIAESCSKVVAVGINCTPPRFIQDLIVSVKQVTTKPIVIYPNSGETYDGIQKQWVKNTGVTDEDFVSYVNNWIESGASLVGGCCRTTPATIKGIYTTLSVSRSVNLAEDSEASDQKILQENVR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00185 352 PANTHER ZGC:172121 2 332 - -
Aip06g00185 352 PIRSF BHMT 281 344 IPR017226 GO:0008168|GO:0008270|GO:0009086
Aip06g00185 352 PIRSF BHMT 7 259 IPR017226 GO:0008168|GO:0008270|GO:0009086
Aip06g00185 352 PANTHER HOMOCYSTEINE S-METHYLTRANSFERASE 2 2 332 - -
Aip06g00185 352 Pfam Homocysteine S-methyltransferase 18 324 IPR003726 -
Aip06g00185 352 Gene3D - 6 324 IPR036589 -
Aip06g00185 352 SUPERFAMILY Homocysteine S-methyltransferase 13 328 IPR036589 -
Aip06g00185 352 ProSiteProfiles Homocysteine-binding domain profile. 5 327 IPR003726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00185 Aip-Chr6 1892694 1896381 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00185 K00547 - gmx:100790567 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00185 06 1892694 1896381 Aip06g00185 06 1892694 1896381 ECH