Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00175 ATGGGTTGGTTCTCATCATCAAAGATGTGCACCATTAATATTGTGATGGCTTTCCTGGTGTCCATGATCTCAAAGGGATTGGCTCTGTCCATCAGTTTAAGCGATATGGAATGCGTATCAGAGCATGTTTTTCATGATGGTGACATCGTTTCTGGCAGTTTTGTTGTCATGGACCATGATATTTTCTGGAATTCTGATCATCCTGGCATTGATTTCACTGTGACAGGTCCAGGTGGAAGCGTGGTGCACTCTTTGAAGGGAACGTCCGGGGACAAGTTTGAGTTCAAAGCGGTGCAAAATGGGATCTACAAATTCTGCTTTATTAACCCTGTTTCAACTCCTGAGACTGTTTCTTTCTACATTCACATTGGCCACATTCCTAACGAAAATGATTTAGCCAAAGATGAGCATTTGGACCCTATCAATGTGAAGATTGCAGAGTTAAGAGAGGCATTGGAATCTATTGTATCAGAGCAGAAGTATTTGAGAGCGCGGGATGCCAGACATAGATACACAAATGAGAGCACTCGAAGAAGGGTAGTGTTCTACACAGTGTTGGAATATGTGTTGTTCGCTGCAACGAGTATATTGCAAGTCGTATACATTCGTCGCCTCTTCAGCAAATCTTTTGCTTACAACCGAGTCTAG 648 0.4275 MGWFSSSKMCTINIVMAFLVSMISKGLALSISLSDMECVSEHVFHDGDIVSGSFVVMDHDIFWNSDHPGIDFTVTGPGGSVVHSLKGTSGDKFEFKAVQNGIYKFCFINPVSTPETVSFYIHIGHIPNENDLAKDEHLDPINVKIAELREALESIVSEQKYLRARDARHRYTNESTRRRVVFYTVLEYVLFAATSILQVVYIRRLFSKSFAYNRV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00175 215 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 46 132 IPR036598 -
Aip06g00175 215 PANTHER EMP24/GP25L/P24 FAMILY/GOLD PROTEIN 7 211 - -
Aip06g00175 215 Pfam emp24/gp25L/p24 family/GOLD 35 206 IPR009038 -
Aip06g00175 215 SMART EMP24_GP25L_2 28 207 IPR009038 -
Aip06g00175 215 ProSiteProfiles GOLD domain profile. 36 123 IPR009038 -
Aip06g00175 215 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 7 211 IPR015720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00175 Aip-Chr6 1772109 1773763 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00175 K20347 - gmx:100789501 353.984