Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00163 ATGCCTTTTACAATGAAGATTCAGCCGATTGATTCTGACGTTTGTGAAGAGACGAGGAGGCTGGAGTTGGTGAAGCCGGTGGCCAAGTGGCGGTTGAAGCGCCTCTTCGAGCGCCAGTTCCCCGGCGTTCTGAGGAGCTCGTCGGCGGCGGCGGTGGCGGTCGAGAAGATCGCCGGCGACGATGCGCATTTCGGCAAGGACGTAGCTGGTGCCGATTTGGAACCGAACTCCGTGTGTCTGGCGAGAATGGTGCAGAGTTTCATGGAAGATAATCACGATAATAAGCACCCGGTTTCCGTTAAGTGTTCCCGTAACCGCTGTAACTGCTTCAACGGCAACTGCGACGACAACTCCGACGGTGAATCGGACGCCGGTTTCGGAGAAACTAACCAGCCTCCCTCCGGCGAAGCTCTCGAAATCCTCAAGGGTTTGGTGGCGTGTGGGAGCAAGAGCGAGAGGAATCTGTTAGCGGACACAGCGAAGATAGTTGAGAAGAACAAGATAATCTGTAAACGCAAAGACGGCGATTGCAGAAAGCTCGTCACGGAGGCTTTGTTAGCTCTTGGCTACGATGCTGCAATCTGCAAATCTCGCTGGGAGAAAACTCCTTTCTATCCCGCTGGGGAATACGAGTACATTGATGTGATAATTGGGAACGAGAGAGTGGTGGTTGACGTTGATTTCAGATCGGAGTTCGAGATTGCTCGCCCGACCAAGGCGTACAAGGCGATCCTTCAAACTGTTCCGTACATATTCGTTGGCAAGTGTGAGCGGTTGCAGAGTATGGTGGCGATTGTGTCGGAGGCGGCGAAGCAGAGCTTGAAGAAGAAGGGAATGCCGGTTCCGCCGTGGAGGAAGGTCGAATACGTCAGAGCGAAATGGCTCTCCCCTCACACGCGAGTTTTTCCGCCTTCCTCCTCGCAAGGGATCAAAAACAACGCGGAGGAAAACCAGGTTTTGGCCGGCGGCGCCGGCGAGTTTAAAGTGAGTCGTGGCGAGTCGGATGAGTCTAATATTGTGATCCAATCCAAACCACCGGAGATAAAGGCCAAGAGCTCGCTCTCTGCTTTGGCTGCTGTGTTAAATGAAACCCCATAA 1098 0.5364 MPFTMKIQPIDSDVCEETRRLELVKPVAKWRLKRLFERQFPGVLRSSSAAAVAVEKIAGDDAHFGKDVAGADLEPNSVCLARMVQSFMEDNHDNKHPVSVKCSRNRCNCFNGNCDDNSDGESDAGFGETNQPPSGEALEILKGLVACGSKSERNLLADTAKIVEKNKIICKRKDGDCRKLVTEALLALGYDAAICKSRWEKTPFYPAGEYEYIDVIIGNERVVVDVDFRSEFEIARPTKAYKAILQTVPYIFVGKCERLQSMVAIVSEAAKQSLKKKGMPVPPWRKVEYVRAKWLSPHTRVFPPSSSQGIKNNAEENQVLAGGAGEFKVSRGESDESNIVIQSKPPEIKAKSSLSALAAVLNETP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00163 365 PANTHER OS03G0796600 PROTEIN 25 358 IPR006502 -
Aip06g00163 365 PANTHER RNA POLYMERASE SUBUNIT BETA-BETA PROTEIN, PUTATIVE (DUF506)-RELATED 25 358 - -
Aip06g00163 365 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 179 300 IPR006502 -
Aip06g00163 365 Pfam PDDEXK-like family of unknown function 82 300 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00163 Aip-Chr6 1641081 1643260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00163 - - ahf:112754473 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00163 06 1641081 1643260 Aip02g00843 02 13549869 13551383 PCT