Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00127 ATGGCGACGCCTCAGAAGGAGCAGAAGCCATGGAAAGCGGAGTATGCCAAGTCAGGGAGATCATCATGCAGGACGTGTAAGGCTCCCATCGACAAGGAGCAATTCCGCCTCGGCAAGATGGTCCAATCCACCAAGTTCGACGGCATCATGGCGATGTGGAACCATGCGGATTGCATATTGAGGAAATCCAACCAGATAAAATTAGTTGATGATGTTGAAGACCTAGAGACTCTTCGCTGGGAAGATCAGCAGAAGGTCAGAAGATATGTAGAAGCTGGTGCATCAACAACAACGAAGTCAAAATCTGTCAAGGATACCGAGTGTGGTATTGAAGTTTCACAGAATGCTCGTGCTACATGCAAACATTGTAGTAAAAAGATCACCAAAGGAGAGGTTCGGATATCTATCAAGCCTGATGGAGGGGGTGCTAAAGGTTTGGCTTGGCATCATGCCAAGTGTTTCATAGAATCATCACCATCAATTCAAGTGGATAAGTTGTCGGGATGGAATAATCTTCCACCTTCTGAACAATCAGCTGTCAGTGCCTTGGCAGGCGATAGTGGTCCAAAAGTTGAGTCCGAAGATACTAAAGAATCCATAAGACGAACCAATTCAAAAGGTGGCACAAAACGTGGGAAGGATGCTGAGGGTGGGCAGAAGTCAAAAGTTGCCAAGGTAAAGGGAGACGAGTCTGCTAGCAGCGTGGCATCAGTGAAAAATTCTAGTGATTTGGATAAGGTAAATGATCTAGAGAATAGATTGGAGGCACAGAGCAAAGAACTCTGGGCTCTAAAGGATGATCTTAAAAAGCACGTGACAACACCAGAGTTGCGTGAAATGCTAGAAGCCAATAATCAAGATTCAACTGGATCAGAACTTGATTTACGTGATCGCTGTGCTGATGGAATGATGTTTGGAGCACTTGGTAGCTGCCCAACATGCTCTGGCAATCTGCACTATTCTGGAGGAATGTACCGGTGCAGTGGATACATTTCTGAGTGGAGTAAATGTTCGTACTCTACCTGTGAATCAAAACGTCTTGAAGGGAAGTGGAAAATCCCAGAGGAAACAGACAACCAGTACCTTAAAAAGTGGTTCAAATCTCAAAAAGGGAAGAAACCAGTTAGGATATTGCCTGCACCGTCAGCAAGGGAAAGTCAAGCTGTTGCTTCTCAGAATCAATCTTCAAATGGTGGAAGTTTGGGAGATTTGAAAGTTGCCATGTGTGGATTTCCTAAAGAAACTATTGCGGAATGGAAATGCAAAATTGAAGGCTTTGGTGGGGAGCTTCATGCAAAAGTGAAGAAAGAAACTAACTGCTTGGTTGTTAGCGGATTGCTCAATGATGAAGTTGAGATGAGGAAGGCAAGGAGGATGAAAATACCAATAGTAAGAGAGGACTATTTGGTTGATTCTATTGAGAAAAAGAAGAAGCTTCCCTTTGATATGTACAAAGTTGAAATGATTGGAGAGTCTTCTAGCATTGTCACAATTAAAGTGAAGGGGCAAAGTGCTGTCCATGAGGCTTCTGGCCTACAGGATTCTGGCCACATACTTGAGGAAAGAGAAACCATTTATAACACAACTTTGAATAAGTCTGATTTATCTACTGGTGTTAACAGCTACTATATTCTCCAAATCATTGAAGAAGACAAGGGTTCAGCATGCTATGTGTTTCGTAAATGGGGCCGAGTGGGAAATGACAAGATTGGAGGAACCAAACTGGATGAAATGTTGAAATCAGATGCAATCAAGGAATTCAAACGATTATTTTATGAGAAGACTGGAAATACTTGGGAGGCTTGGGAGCAAAAGACTATTCAGAAGCAACCTGGAAAGTTCTTCCCATTGGATATTGATTATGGAGTTAACAAACAGGTTTCAAAGAAAAACAGAAATGACGAGGACAGCAAACTACCACCTGCATTAAAAGAATTGATGAAAATGCTCTTCAACGTGGAAACATACAGAGCTGCCATGATGGAATTTGATATTAATATGTCCGAAATGCCACTTGGGAAACTGAGCAAAAGTAATATTCAAAAAGGGTTTGAAGCATTAACAGATATACAGAATCTCCTAACTAAGAATTCTGACCCATCAGTCCGGGAAAGCTTGCTTATTGATGCCAGCAATCGGTTCTTTACTTTGATCCCATCTATTCATCCACATATTATTAGGGATGACGATGATTTTAAGTCAAAGGTGAAAATGTTAGAAGCTCTTCAAAACATTGAAATAGCTTCTAGATTAGTTGGATTTGATGCTAACAGTGATGACTCCATTGATGATAAGTATAAGAAGCTCCAGTGTGTCATGTCTCCTCTACCTCATGATAGTGAAGATTATCGATTGATTGAGAAGTATCTCCATACTACTCATGCTCCCACACATACGGAATGGAGTCTTGAGCTAGAAGAAGTTTTTTCCCTTGAAAGGCAAGGAGAATTTGATAAGTATGCTCCCTATAGGGAGAAACTTGGTAACAAAATGCTACTATGGCACGGTTCTAGGGTGACAAATTTTGTGGGTATTCTTAGCCAAGGACTTAGAATTGCACCTCCGGAGGCCCCGGTGACTGGCTACATGTTTGGCAAAGGTATTTACTTTGCTGACTTGGTCAGCAAGAGTGCTCAGTATTGTTTCACTGAAAAGAAAAATCCTGTTGGTCTAATGCTTTTGAGTGAAGTTGCCCTTGGAAATGTCTATGAGCTCAAGAAAGCTAAGTACATGGATAAGCCTCCCGAAGGAAAGCACTCTACTAAAGGCCTTGGCAAGAAAGTGCCTAATGAATCAGAACATGTTAAGTGGAGGGACGATGTCACGGTTCCCTGTGGCAAGCCTGTGCCATCAAATGTCAAGACTTCTGAGCTCATGTACAATGAGTATATTGTGTATAACACTTCTCAAGTTAAGTTGCAATATTTGTTGAAGGTGAGGTTCCATCACAAGAGATGA 2958 0.4185 MATPQKEQKPWKAEYAKSGRSSCRTCKAPIDKEQFRLGKMVQSTKFDGIMAMWNHADCILRKSNQIKLVDDVEDLETLRWEDQQKVRRYVEAGASTTTKSKSVKDTECGIEVSQNARATCKHCSKKITKGEVRISIKPDGGGAKGLAWHHAKCFIESSPSIQVDKLSGWNNLPPSEQSAVSALAGDSGPKVESEDTKESIRRTNSKGGTKRGKDAEGGQKSKVAKVKGDESASSVASVKNSSDLDKVNDLENRLEAQSKELWALKDDLKKHVTTPELREMLEANNQDSTGSELDLRDRCADGMMFGALGSCPTCSGNLHYSGGMYRCSGYISEWSKCSYSTCESKRLEGKWKIPEETDNQYLKKWFKSQKGKKPVRILPAPSARESQAVASQNQSSNGGSLGDLKVAMCGFPKETIAEWKCKIEGFGGELHAKVKKETNCLVVSGLLNDEVEMRKARRMKIPIVREDYLVDSIEKKKKLPFDMYKVEMIGESSSIVTIKVKGQSAVHEASGLQDSGHILEERETIYNTTLNKSDLSTGVNSYYILQIIEEDKGSACYVFRKWGRVGNDKIGGTKLDEMLKSDAIKEFKRLFYEKTGNTWEAWEQKTIQKQPGKFFPLDIDYGVNKQVSKKNRNDEDSKLPPALKELMKMLFNVETYRAAMMEFDINMSEMPLGKLSKSNIQKGFEALTDIQNLLTKNSDPSVRESLLIDASNRFFTLIPSIHPHIIRDDDDFKSKVKMLEALQNIEIASRLVGFDANSDDSIDDKYKKLQCVMSPLPHDSEDYRLIEKYLHTTHAPTHTEWSLELEEVFSLERQGEFDKYAPYREKLGNKMLLWHGSRVTNFVGILSQGLRIAPPEAPVTGYMFGKGIYFADLVSKSAQYCFTEKKNPVGLMLLSEVALGNVYELKKAKYMDKPPEGKHSTKGLGKKVPNESEHVKWRDDVTVPCGKPVPSNVKTSELMYNEYIVYNTSQVKLQYLLKVRFHHKR 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00127 985 Gene3D BRCT domain 391 493 IPR036420 -
Aip06g00127 985 ProSiteProfiles PARP alpha-helical domain profile. 636 753 IPR004102 GO:0003950
Aip06g00127 985 Gene3D - 104 190 IPR036957 GO:0003677|GO:0008270
Aip06g00127 985 Gene3D - 626 769 IPR036616 GO:0003950
Aip06g00127 985 ProSiteProfiles WGR domain profile. 515 614 IPR008893 -
Aip06g00127 985 ProSiteProfiles BRCT domain profile. 423 486 IPR001357 -
Aip06g00127 985 PANTHER DNA LIGASE 52 979 - -
Aip06g00127 985 SUPERFAMILY WGR domain-like 493 619 IPR036930 -
Aip06g00127 985 Gene3D - 770 985 - -
Aip06g00127 985 MobiDBLite consensus disorder prediction 166 241 - -
Aip06g00127 985 MobiDBLite consensus disorder prediction 166 182 - -
Aip06g00127 985 SMART zf_PARP_3 111 185 IPR001510 GO:0003677|GO:0008270
Aip06g00127 985 SMART zf_PARP_3 14 91 IPR001510 GO:0003677|GO:0008270
Aip06g00127 985 ProSiteProfiles PARP catalytic domain profile. 760 985 IPR012317 GO:0003950
Aip06g00127 985 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 11 94 IPR001510 GO:0003677|GO:0008270
Aip06g00127 985 SMART WGR_cls 526 609 IPR008893 -
Aip06g00127 985 CDD parp_like 637 980 - -
Aip06g00127 985 MobiDBLite consensus disorder prediction 190 227 - -
Aip06g00127 985 Gene3D - 2 103 IPR036957 GO:0003677|GO:0008270
Aip06g00127 985 Pfam BRCA1 C Terminus (BRCT) domain 404 473 IPR001357 -
Aip06g00127 985 Coils Coil 240 267 - -
Aip06g00127 985 PIRSF NAD_ADPRT 4 985 IPR008288 GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287
Aip06g00127 985 SMART BRCT_7 399 476 IPR001357 -
Aip06g00127 985 MobiDBLite consensus disorder prediction 1 20 - -
Aip06g00127 985 Pfam Poly(ADP-ribose) polymerase, regulatory domain 637 766 IPR004102 GO:0003950
Aip06g00127 985 Pfam WGR domain 526 604 IPR008893 -
Aip06g00127 985 SUPERFAMILY BRCT domain 400 486 IPR036420 -
Aip06g00127 985 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 637 769 IPR036616 GO:0003950
Aip06g00127 985 PANTHER POLY [ADP-RIBOSE] POLYMERASE 1 52 979 - -
Aip06g00127 985 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 108 196 - -
Aip06g00127 985 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 108 180 IPR001510 GO:0003677|GO:0008270
Aip06g00127 985 SMART PADR1_2 295 348 IPR012982 -
Aip06g00127 985 CDD WGR_PARP1_like 516 621 - -
Aip06g00127 985 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 8 99 - -
Aip06g00127 985 Pfam PADR1 (NUC008) domain 297 346 IPR012982 -
Aip06g00127 985 Pfam Poly(ADP-ribose) polymerase catalytic domain 780 981 IPR012317 GO:0003950
Aip06g00127 985 SUPERFAMILY ADP-ribosylation 769 984 - -
Aip06g00127 985 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 14 90 IPR001510 GO:0003677|GO:0008270
Aip06g00127 985 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 111 181 IPR001510 GO:0003677|GO:0008270
Aip06g00127 985 Gene3D - 233 306 - -
Aip06g00127 985 Gene3D - 307 367 IPR038650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00127 Aip-Chr6 1229184 1236779 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00127 K24070 - gmx:100800968 1595.1