Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00122 ATGTTTAGAAGGCCAAGGGGTCCCGATGTTTTTAGTATATTCAAATGCAAAGATCAAGGGGAATCATCTCTGGCAACAGATTTACTTCAAAATATTCCACTAGAGGTTGAATTGTCTGATTATAGAAGGGTCCCAAGTCCTGACAGTGAGAGCCCTTCCGGACTTCTTCATGGTGAGAGCCTAAATGCAGAACCTATTGCTGATTTAGATCTCTTCTTCGAAAGGCTTTACAGCTACTACTGTGAGAAAGGGATTTGGTGCATCATTATAAAATGGATTGGTGAACTTCTTAGCCTGGGTTTCACCATATGTTTTTCGGGATTTTTTCTACTATATGTTGATTGGAATGGGCTCCGCAATGCAAAGTGTGGGATGGATGCGGTTGAGTCTGGAATTAAGCCCTGTGATCTTGCTAAAGAAGCTCTTCATGAACACCCATTAACCCCAATGACTCTTACGAAAGCTATTATAGTTGGATACTTAGGAATATTTTCCATGTATTGGATATTTTGCTTCTTGAGATTCTTTGCCCAGCTAAAGGATACTTTGGAAATCCGAGAGTTTTATTACAATAGTCTCCATGTTACAGACAATGAAATACAAACAATGTCCTGGGCTACTATTATTGAAAAAGTTGTTAGGGTACAAAGTTCTAAACATCTTTGTGTTGTAAAGAATCTGTCTGCCCATGACATGGTAATGAGATTGATGCGGAAGGAGAACTACTTAATTGGGATGCTAAACAAGGGTGTGCTTGCCTTCCCCATTTCTCAATGGGTTCCAGGTGCTGGTCCTACAGTGGCATATAGTCCTAATGGAACCCATTATCGTCTAACACTAACTAAGACCCTTGAGTGGACTTTGAATTGGTGCATCTTGCAAAGCATGTTTGATCGGAACTTTTGTGTGAAAAGGGATTTTGTGTCAAATCCAAATGCATTACAGAAAAGGCTTATGGTAGTTGGCTTTGCAATGCTTTTACTTTCTCCATTTCTTATCATATTCATGTTGGTATATCTCTTTCTGAGGCATGCTGAACAACTTTATAACCATCCAAGCACGGCATCATCTCGGAGATGGTCAAATTTGTCAAGGTGGATATTTAGGGAATTCAATGAGGTGGAGCATCTCTTCAAACATCGAATTTATAGCGGTGTCTTGCATGCGTCTGAATATATCAAGCAATTTCCTTCACCTATCATATCTATCATTGCAAAATTCATCTCTTTTGTATCGGGTGGCTTTGCTGCAATTCTGATCATCATAGCTTTTCTTGAGGAGTCTCTGCTCGAGGGCCATATATTTGGCCGGAATCTGTTTTGGTATGCCGCTGTTTTTGGAACTATAACTGCCATCAGCCGGGCTGCAATTACAACTGAGCTGTTGGTCTTAGACCCTGAGGGAACCATGTCTATGGTGGTTCAGTATACACATTATATGCCAAAAAGATGGCGTGGCAAAGAAAATACTGAAATGGTTCGCATCGAGTTTGAAACCTTATTCCAGTACACTGGAATGATGCTACTTGAGGAGATGGCCTCGATTTTCCTCACACCATATTTACTTCTGTTTGTTGTTCCAAAGCGGGTTGATGATATATTGCAGTTCATTTCTGATTTTACCGTAAATGTTGAAGGTGTTGGTCATGTTTGCAGTTTTAGCACCTTTGATTTTCAAGAGCATGGAAACAGCCGTTATGGTTCCCCACACAATGCGCCACGTAATCGAAGGAGCTCACAGGGGAAGATGGAGAAATCATTGTTGAGTTTTCAGAGTAGTTACCCTTCATGGGACCCGAATGTTCTAGGGAAGCAGTTTTTGCGAAATGTTAGAAGCTTCAGAGAGCAGAGGTTATCAGGATACAGAAGCGGACATGCATTTTCCTGTCCACAATGGAGGGGTCGTCCGAATGTGGGAGGCGATGGAGAAAGAAACCAGTTCATATCCTGGGAAGTGCCAAACAGTATTCTTGAAACTGCCAACCAAAAGAATCATCCCTACCTGATTGACTGGTACTATACATCTCAACCTTGTGATGCGGCTCTCGAAGATGTTCCATCAGAACCTTTCGGAGTAACTGAGCCTGCATACGAAGAATACTCACATGAGTGTTGTGAGGATCGCGCTGCGTCGACTCCAATCTTCAGGGAAAGCCTTATTAAGGATGAAAATTCAAATGAACTGTTCCCAAATGCCCAGAGTCATTGGTGGGATAAATGTCGGCTGCAAGGTGGACAAGTTCAAACAAGCTTTTTTGAGCCTCCGGATTTCAATCACCGAACAGAATATAGTCATTGTGAAGAGTTTTCTAACCGAGGAGCAGAGGATCAAGATCAAGAACATTGCTTGTACTGGCAAAACCACCATTGGTTATCTAGAGAAGCTTGCTCAGATGACTTAGAGGCAGGAGAATTTAATCTTCATTTTGATAATGTTTATAGCAGACCTCCAGAATCACCCACTGTAAATTCCAGATCTTCTAGCTTTGAGTGA 2493 0.4156 MFRRPRGPDVFSIFKCKDQGESSLATDLLQNIPLEVELSDYRRVPSPDSESPSGLLHGESLNAEPIADLDLFFERLYSYYCEKGIWCIIIKWIGELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCDLAKEALHEHPLTPMTLTKAIIVGYLGIFSMYWIFCFLRFFAQLKDTLEIREFYYNSLHVTDNEIQTMSWATIIEKVVRVQSSKHLCVVKNLSAHDMVMRLMRKENYLIGMLNKGVLAFPISQWVPGAGPTVAYSPNGTHYRLTLTKTLEWTLNWCILQSMFDRNFCVKRDFVSNPNALQKRLMVVGFAMLLLSPFLIIFMLVYLFLRHAEQLYNHPSTASSRRWSNLSRWIFREFNEVEHLFKHRIYSGVLHASEYIKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAITTELLVLDPEGTMSMVVQYTHYMPKRWRGKENTEMVRIEFETLFQYTGMMLLEEMASIFLTPYLLLFVVPKRVDDILQFISDFTVNVEGVGHVCSFSTFDFQEHGNSRYGSPHNAPRNRRSSQGKMEKSLLSFQSSYPSWDPNVLGKQFLRNVRSFREQRLSGYRSGHAFSCPQWRGRPNVGGDGERNQFISWEVPNSILETANQKNHPYLIDWYYTSQPCDAALEDVPSEPFGVTEPAYEEYSHECCEDRAASTPIFRESLIKDENSNELFPNAQSHWWDKCRLQGGQVQTSFFEPPDFNHRTEYSHCEEFSNRGAEDQDQEHCLYWQNHHWLSREACSDDLEAGEFNLHFDNVYSRPPESPTVNSRSSSFE 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00122 830 Pfam Autophagy protein ATG9 64 557 IPR007241 GO:0006914
Aip06g00122 830 PANTHER AUTOPHAGY-RELATED PROTEIN 9 693 822 - -
Aip06g00122 830 PANTHER AUTOPHAGY-RELATED PROTEIN 9 1 689 - -
Aip06g00122 830 PANTHER APG9 AUTOPHAGY 9 1 689 IPR007241 GO:0006914
Aip06g00122 830 PANTHER APG9 AUTOPHAGY 9 693 822 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00122 Aip-Chr6 1155337 1161480 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00122 K17907 - gmx:100779344 1260.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00122 06 1155337 1161480 Aip06g00122 06 1155337 1161480 ECH
Aip06g00122 06 1155337 1161480 Aip02g00941 02 16340505 16347503 PCT