Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00063 ATGGCTTTGAGAAAATCTACTAGGCTTCATCAAGCACCACTTCTCAAGCAAATTCTCAAGAGATGCTCAAGTTTAGGGAAGAAGCAAGGCTTTGATAATGATGTTCCAAAGGGTCACTTTGTTGTGTATGTTGGAGAGAATAGAAGCAGGTACATTGTCCCAATTTCAATTCTAAGGTGCCCTAGCTTCCAAACTTTGCTCCATCAAGCTGAAGAAGAGTTTGGTTTTGATCATGAAGGAGGTCTCACTATCCCTTGTCATGAGGATGTTTTTGAGTCTCTTGTTACATCATCCATTTAG 300 0.4033 MALRKSTRLHQAPLLKQILKRCSSLGKKQGFDNDVPKGHFVVYVGENRSRYIVPISILRCPSFQTLLHQAEEEFGFDHEGGLTIPCHEDVFESLVTSSI 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00063 99 Pfam Auxin responsive protein 22 96 IPR003676 GO:0009733
Aip06g00063 99 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 7 98 - -
Aip06g00063 99 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00063 Aip-Chr6 581329 581807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00063 14 96 Calmodulin-binding Proteins AT4G34750 44.578 1.71e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00063 K14488 - pvy:116128449 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00063 06 581329 581807 Aip05g00904 05 12483877 12484557 ECH
Aip06g00063 06 581329 581807 Aip07g02440 07 102646444 102648944 ECH
Aip06g00063 06 581329 581807 Aip06g00063 06 581329 581807 ECH