Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03933 ATGAAAGAAAGCATAGTTTTATACCCAGCCATGGGAAGGGGTCACCTTGTTCCAATGGTGGAACTCGCCAAGTTCATAACCACCCACCACAACGCCACCATCTCCGTCACCCTCCTCCTTCCTTCCCCACCAAACAGATCCACCCTCCACTACATCTCCACCGTCACCGCCGCCGCACCCTCCATCACCTTCCACCAACTCTCCCACTCAAACCATAACATCCTTGGCACCCTCCAATCCTTCCCCACGAAGCCTAAAGCCTTCATCTTTGACTTCTTCAACCACTCTGCCGCCGCCACTGCCGCTTCTCTCAACATCCCCACGTTCTATTACTTCCCCAACGCCGCAAGCTGCGTCGCACTCTTCCTCTACCTCCCAACCATCCACCAAAATTCCATAAAATACGGTTATTCTTACGTGGACATGCTTCGTAGCATTCCCGGTTTGCCACCTCTCTCGCCGGAGGACATGCCGGCACCCATATCCGATCGCCGCAGCCAGAGCTACGAGTCCTTCATCACCATGTCACTTCACATGAGAAACACCAATGGCATCATCATCAACACCTTCGAAAATCTCGAACCCAAAGCCATCATGGCTCTGAAAAATTCTGCGTGCGTTCCAGAATCATCGGAAACTTCACCACTGGTTTTCTGCGTTGGACCACTGATTTCCACCACCAAAGGATCTGATCCTGTTGGTGATGATGGTGGTAGAGAGTGTTTAAGTTGGCTGAACTCGCAACCGAGTCGAAGCGTGGTGTTCTTGAGCTTCGGAAGCTATGGAAGATTCTCGAAGGTTCAGATGAGAGAGATAGCGGTTGCGTTGGAGAGATGTGGAAAGAGGTTCTTGTGGGTTGTGAGGGATCCAATGGGAAGTGAAGTGGTGAATTTGGAAGCGTTGTTGCCGAAAGGGTTCTTAGAGAGAACGAAGGAGAAGGGAATGGTGATCAAGAATTGGGTGCCGCAAGTTGAGGTACTGAGTCATGACTCGGTGGGTGGGTTTGTGACTCACTGTGGTTGGAACTCGGTGATGGAGGCGGTTACCTTTGGGGTCCCGATGGTGGCGTGGCCGTTGTACGCGGAACAGAATCTGAATAAGGTGGTTATTGTGGAGGAGATGAAGGTGGCGTTGCCGTTGAAGGAGGATGAGGGTGGGTTCGTGAGGGCGAGTGAATTGGAGGAACGAGTTATTGAGCTTATGAAATCGGAGACAAGGAGGGGAAAGGAGGTTAGAGAGAGGATGTTGGCTGCCAGGAACGGTGGTGCCGCCGCTCTCGCCGGCGGTGGGTCTTCGCGGGTTGCTTTGGATGGGTTGGTTCATTTGTGGAAGCAAAAATGA 1341 0.5227 MKESIVLYPAMGRGHLVPMVELAKFITTHHNATISVTLLLPSPPNRSTLHYISTVTAAAPSITFHQLSHSNHNILGTLQSFPTKPKAFIFDFFNHSAAATAASLNIPTFYYFPNAASCVALFLYLPTIHQNSIKYGYSYVDMLRSIPGLPPLSPEDMPAPISDRRSQSYESFITMSLHMRNTNGIIINTFENLEPKAIMALKNSACVPESSETSPLVFCVGPLISTTKGSDPVGDDGGRECLSWLNSQPSRSVVFLSFGSYGRFSKVQMREIAVALERCGKRFLWVVRDPMGSEVVNLEALLPKGFLERTKEKGMVIKNWVPQVEVLSHDSVGGFVTHCGWNSVMEAVTFGVPMVAWPLYAEQNLNKVVIVEEMKVALPLKEDEGGFVRASELEERVIELMKSETRRGKEVRERMLAARNGGAAALAGGGSSRVALDGLVHLWKQK 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03933 446 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 238 369 IPR002213 GO:0008194
Aip05g03933 446 Gene3D Glycogen Phosphorylase B; 238 427 - -
Aip05g03933 446 PANTHER GLYCOSYLTRANSFERASE 73 445 - -
Aip05g03933 446 PANTHER GLYCOSYLTRANSFERASE 1 71 - -
Aip05g03933 446 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 443 - -
Aip05g03933 446 ProSitePatterns UDP-glycosyltransferases signature. 320 363 IPR035595 -
Aip05g03933 446 PANTHER GLYCOSYLTRANSFERASE 73 445 - -
Aip05g03933 446 PANTHER GLYCOSYLTRANSFERASE 1 71 - -
Aip05g03933 446 Gene3D Glycogen Phosphorylase B; 5 433 - -
Aip05g03933 446 CDD GT1_Gtf-like 5 415 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03933 Aip-Chr5 147544763 147546140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03933 2 446 Glycosyltransferase AT3G16520 42.737 1.48e-119 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03933 - K12938 gmx:100807122 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03933 05 147544763 147546140 Aip05g03933 05 147544763 147546140 ECH