Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03917 ATGAGTTCATTCTTTGATGAACAGGCACCATGTTGTGGAACTCATTTTTGGGTTATGGTAATCATGTGTTGGATCTTTGTACTATTTGCTGCTATCACATCTGGTTTAGCTCTTGGGCTCTTGTCCTTTAGCCAAGTTGATCTTGAGGTTCTTGTTAAAGCTGGCCAACCTCATATTCAGAAAAATGCTGCAAAGATTATGCCAATTATTAAGAATGAGCATTTACTTTTAAGCGCCCTCCTCATAGCTAAATCATTGGCATTGGAGGGGGTTTCTGTTTCTATGGAGAAAATGTTCCCAGAGTGGCTTGCAGTAATCATATCAGCTACCCTTTTAGGTATCATTGCTGAGATTATCCCTCAAGCATTGTGCTCTAGATATGGTTTGAGTGTTGGGGCAACCATGACTCCCTTTGTGAAAGTACTTCTGTTGATTTTCTTCCCCATTGCATATCCAATTAGTAAGGTGTTGGATTGGCTTTTTGGCAAGGGGCATAGTGCACTTCTAGGAAGAGAAGAGCTCAAGGCTTTGGTTCATTTACATTCCAATGAGGCAGGTAAAGGGGGAGAGTTGTCACTACATGAAGCTACAATAATTGCTGGAGCATTAGACTTAACTTTGAAGACTGCTAAAGATGCCATGACACCAATAAGTGAAACATTTTCTCTGGACATTAACTCCAAACTCAACATGCATACAATGGCCTTGATAATGAGCAAAGGTCACAGCCGTATACCAATTTATTCTGGAATACCAACAAATATTGTTGGTATTATCCTGGTCAAGAATTTAATCTTCTGTCGTCTGGAAGACGAAACGCCCATTAAACATATGACGATTAGGAGAGTTCCTAGAGTAGGTGAAAATTGGCCACTATATGAGATCTTGAATCAATTTCAAAAGGGTCAAAGCCATATGGCTGTTGTCATCAAGGGTGAAGTGAACATCAAAGATGCTGCAACTGATTCACATGGACTTCGCGCCTTTGAAATGGTTGATTATACTAGTATGTCAACTGATGCATCAAATTTGACCTCACAAGAAACAGAATATTATAGTGCAACACTAAAGAATACCATGAAGCTAGAGGGTGACTCGGATGCATTGCGCGCAAGATCACGATGCGAAAGCGAAGCAAATGCATCATTTGAGAACGTGGAAGCTCTTAATGTTCATGAAGAAGTAATTGGGATAATAACATTGGAAGATGTTATGGAAGAGCTACTTCAGGATGATATACTGGATGAAACTGATCAATATGTTGATGTTCATCAAAATATCAAGATCAAACTGCAAAATCCAAGAAGAATGTCATCAGGGTCCTCCAGAAGATCCTCAAATTCTAATCAATGGTGGAGAAATTCAGACGCATCTCGAGTTTGCTTCTTAACTCCTACATATGTTTCACCCATTTCGGAAACTAACCAGAACTGA 1434 0.3961 MSSFFDEQAPCCGTHFWVMVIMCWIFVLFAAITSGLALGLLSFSQVDLEVLVKAGQPHIQKNAAKIMPIIKNEHLLLSALLIAKSLALEGVSVSMEKMFPEWLAVIISATLLGIIAEIIPQALCSRYGLSVGATMTPFVKVLLLIFFPIAYPISKVLDWLFGKGHSALLGREELKALVHLHSNEAGKGGELSLHEATIIAGALDLTLKTAKDAMTPISETFSLDINSKLNMHTMALIMSKGHSRIPIYSGIPTNIVGIILVKNLIFCRLEDETPIKHMTIRRVPRVGENWPLYEILNQFQKGQSHMAVVIKGEVNIKDAATDSHGLRAFEMVDYTSMSTDASNLTSQETEYYSATLKNTMKLEGDSDALRARSRCESEANASFENVEALNVHEEVIGIITLEDVMEELLQDDILDETDQYVDVHQNIKIKLQNPRRMSSGSSRRSSNSNQWWRNSDASRVCFLTPTYVSPISETNQN 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03917 477 Gene3D - 365 416 IPR046342 -
Aip05g03917 477 Gene3D - 195 332 IPR046342 -
Aip05g03917 477 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 6 474 IPR045095 GO:0010960
Aip05g03917 477 SUPERFAMILY CBS-domain pair 199 410 IPR046342 -
Aip05g03917 477 Pfam Cyclin M transmembrane N-terminal domain 23 184 IPR002550 -
Aip05g03917 477 PANTHER CBS DOMAIN PROTEIN 6 474 - -
Aip05g03917 477 CDD CBS_pair_CorC_HlyC_assoc 209 310 IPR044751 -
Aip05g03917 477 ProSiteProfiles CNNM transmembrane domain profile. 12 195 IPR002550 -
Aip05g03917 477 MobiDBLite consensus disorder prediction 432 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03917 Aip-Chr5 147341343 147344923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03917 K16302 - gmx:100798424 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03917 05 147341343 147344923 Aip05g03917 05 147341343 147344923 ECH