Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03904 ATGCTCTCTCTCCACCGTCTCCCCGGCGTCCCCACCGCCAAACCACCACTTTTTCCGTCTACCTCAACCTTCACCCACCCACCACGACGACCTACATTCCTCTTCCCCCAATCCAAAACCCTACCAAAACCCCCAAAATTCCACAAATCCCCCACCGCCCTCCTCCAGTGGAACCGCAAACCCCAGCTCTCCGGCGAAACCCCCCGCGTAGTCGTCGTCACCTCCGGAAAAGGCGGCGTCGGTAAGACCACAACCACCGCCAACATCGGCCTCTCCCTCGCCAGACTCGACTTCTCCGTCGTCGCCATCGACGCCGACGTCGGCCTCCGCAACCTCGACCTCCTCTTAGGCCTCGAGAATCGCGTGAACTACACCGCCCTCGAGGTTCTCAACGGCGATTGCAGGCTCGACCAGGCTCTCGTCAGGGACAAGCGTTGGTCCAACTTTGAATTGCTCTGCATTTCAAAGCCTAGGTCAAAATTGCCCCTAGGGTTTGGAGGAAAAGCCCTAATTTGGCTCGTCGATGCTCTCAAATCGCGCACAGAAGGTTGCCCTGACTTCATCCTCATTGATTGCCCCGCCGGCATCGACGCTGGATTCATCACCGCCATAACGCCGGCGAACGAGGCAATTCTGATAACCACACCAGATATAACTGCCCTTAGAGATGCTGATAGGGTTACTGGTTTGCTTGAATGTGATGGAATTAGGGACATAAAGATGATTGTGAATAGAGTCAGGACAGATATGATTAAGGGTGAGGACATGATGTCTGTTCTTGATGTACAAGAAATGCTAGGGTTGCCGCTGCTCGGAGCGATTCCGGAGGATTCGGAGGTTATAAGGAGTACCAATAGAGGGTACCCTTTGGTTCTGAATAAGCCTCCAACATTGGCAGGGTTGGCATTTGAGCAAGCAGCTTGGAGGCTTGTGGAGCAAGATACAATGCAAGCTGTCATGGTTGAGGAGGAGCCAAAGCGTGGCTTTTTCTCCTTCTTTGGTGGCTAA 1008 0.5397 MLSLHRLPGVPTAKPPLFPSTSTFTHPPRRPTFLFPQSKTLPKPPKFHKSPTALLQWNRKPQLSGETPRVVVVTSGKGGVGKTTTTANIGLSLARLDFSVVAIDADVGLRNLDLLLGLENRVNYTALEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALIWLVDALKSRTEGCPDFILIDCPAGIDAGFITAITPANEAILITTPDITALRDADRVTGLLECDGIRDIKMIVNRVRTDMIKGEDMMSVLDVQEMLGLPLLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDTMQAVMVEEEPKRGFFSFFGG 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03904 335 Pfam CobQ/CobB/MinD/ParA nucleotide binding domain 71 289 IPR002586 -
Aip05g03904 335 PANTHER SEPTUM SITE-DETERMINING PROTEIN MIND HOMOLOG, CHLOROPLASTIC-RELATED 44 334 - -
Aip05g03904 335 Gene3D - 68 323 IPR027417 -
Aip05g03904 335 MobiDBLite consensus disorder prediction 1 30 - -
Aip05g03904 335 CDD MinD 69 310 - -
Aip05g03904 335 PANTHER SEPTUM SITE-DETERMINING PROTEIN MIND HOMOLOG, CHLOROPLASTIC-RELATED 44 334 - -
Aip05g03904 335 TIGRFAM minD_bact: septum site-determining protein MinD 69 330 IPR010223 GO:0016887
Aip05g03904 335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 314 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03904 Aip-Chr5 147230881 147232237 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03904 K03609 - gmx:100803741 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03904 05 147230881 147232237 Aip05g03904 05 147230881 147232237 ECH